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微生物 : Bacillus subtilis

微生物株情報

NBRC番号 3134
学名 Bacillus subtilis
別名（シノニム） Bacillus subtilis subsp. subtilis
由来 IFO 3134 <- Iowa State Coll. (1A29) <- ATCC 6633 <- N.R. Smith, 231 <- K.F. Kellerman
他保存機関番号 ATCC 6633=BCRC 10447=CCM 1999=CECT 356=CIP 52.62=DSM 347=IAM 1069=JCM 2499=KCTC 1021=KCTC 1914=KCTC 2189=NCIB 8054=NCIMB 8054=NCTC 10400=NCTC 6752=NRIC 1022=NRIC 1521=NRRL B-209=NRRL B-354=VTCC B-0786=WHO 9
他株番号 1A29=231=PCI 219
参考文献
7764545
Purification, characterization, and production of two pectic transeliminases with protopectinase activity from Bacillus subtilis. (Biosci Biotechnol Biochem. 1994)
10425781
Relationship of Bacillus subtilis clades associated with strains 168 and W23: a proposal for Bacillus subtilis subsp. subtilis subsp. nov. and Bacillus subtilis subsp. spizizenii subsp. nov. (Int J Syst Bacteriol. 1999)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBSU6633_07741 BSU6633_17125
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU6633_06094
任意 
BLAD
(NRULE_0125)
Beta-lactamase class DBSU6633_13722
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBSU6633_00650
TRPE
(NRULE_0143)
Anthranilate synthase component IBSU6633_17963
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseBSU6633_02604
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseBSU6633_04889 BSU6633_05219
B
AZR
(NRULE_0237)
NADPH azoreductaseBSU6633_14662
Arsenical resistance(NFUNC_0004)
必須B
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinBSU6633_17350
ARSC2
(NRULE_0018)
Arsenate reductaseBSU6633_17355
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBSU6633_10541
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU6633_06094
D
BLAD
(NRULE_0125)
Beta-lactamase class DBSU6633_13722
Betaine biosynthesis (from choline)(NFUNC_0049)
必須B
GBSB
(NRULE_0176)
Alcohol dehydrogenaseBSU6633_11405
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseBSU6633_11410
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseBSU6633_07431 BSU6633_12877
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseBSU6633_12872
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDBSU6633_12882
BIOB
(NRULE_0185)
Biotin synthaseBSU6633_12887
Fosfomycin resistance(NFUNC_0023)
必須B
FOSB
(NRULE_0099)
Metallothiol transferase FosBBSU6633_07851
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseBSU6633_01834
D
ERE
(NRULE_0168)
Erythromycin esteraseBSU6633_13827
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBSU6633_13942
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBSU6633_11645 BSU6633_01744
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBSU6633_08761
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRBSU6633_19947
Milk clotting(NFUNC_0072)
必須A
MCP
(NRULE_0235)
Milk-clotting proteaseBSU6633_08081
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBSU6633_08761
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBSU6633_08756
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBSU6633_18098
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBSU6633_18088
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBSU6633_10501 BSU6633_08291
PANC
(NRULE_0118)
Pantothenate synthetaseBSU6633_18093
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU6633_06094
B
BLAD
(NRULE_0125)
Beta-lactamase class DBSU6633_13722
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseBSU6633_05964
任意 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinBSU6633_16395 BSU6633_18023 BSU6633_15212
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseBSU6633_09016 BSU6633_17380
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseBSU6633_00130
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseBSU6633_14177
RIBA
(NRULE_0201)
GTP cyclohydrolase-2BSU6633_14177
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDBSU6633_14187
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseBSU6633_14172
RIBE
(NRULE_0204)
Riboflavin synthaseBSU6633_14182
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFBSU6633_07276
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinBSU6633_16250 BSU6633_05029 BSU6633_04837
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinBSU6633_05034 BSU6633_04842 BSU6633_04832 BSU6633_05024 BSU6633_16245
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinBSU6633_04827 BSU6633_16240 BSU6633_05039
C
BCCT
(NRULE_0220)
BCCT family transporterBSU6633_12947
E
OPUE
(NRULE_0222)
Sodium/proline symporterBSU6633_16360 BSU6633_03437
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBSU6633_17736
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBSU6633_17731

ゲノム配列情報

BioProject IDPRJNA43011
ローカスタグ
INSDC entriesADGS01000000
ステータスWGS
解析状況
コンティグ数37
サイズ(bp) 3,978,576
遺伝子数 4,038
フィニッシングゴール
アセンブル方法Newbler assembler v. 1.1.02.15
冗長度30x
シーケンス方法
  • 454
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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