遺伝子 : Ring-hydroxylating dioxygenase beta subunit (RHDB)
遺伝子情報
ID | NRULE_0049 |
---|---|
遺伝子ID | RHDB |
作成日 | 2012/08/21 |
タンパク質名 |
Protein name
Synonym
|
遺伝子名 | 該当データなし |
遺伝子条件 | PFAM; PF00866; hit=1 |
参照 |
Gene Ontology
Family and domain databases
|
配列の特徴 | 該当データなし |
注釈 |
|
参考文献 |
|
関与する機能
機能名 |
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Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase) |
Naphthalene degradation (via hydroxylation by dioxygenase) |
該当CDS
学名 | NBRC番号 | CDS | タンパク質名 |
---|---|---|---|
Acetobacter pasteurianus | 105190 | APA32_22040 | Aromatic-ring-hydroxylating dioxygenase beta subunit |
Acetobacter pasteurianus | 101655 | APT_2200 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Acetobacter tropicalis | 101654 | ATPR_0337 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Acinetobacter radioresistens | 102413 | ACRAD_06_00550 | putative 3-phenylpropionate dioxygenase subunit beta |
ACRAD_11_01090 | anthranilate 1,2-dioxygenase small subunit | ||
ACRAD_20_00030 | benzoate 1,2-dioxygenase small subunit | ||
ACRAD_20_01470 | anthranilate 1,2-dioxygenase small subunit | ||
Acinetobacter sp. | 100985 | ACT4_038_00450 | benzoate 1,2-dioxygenase small subunit |
Amycolatopsis azurea | 14573 | C791_5875 | 3-phenylpropionate dioxygenase beta subunit |
Amycolatopsis mediterranei | 13415 | RAM_36650 | hypothetical protein |
RAM_37080 | hypothetical protein | ||
Bradyrhizobium diazoefficiens | 14792 | blr3401 | probable aromatic 1,2-dioxygenase beta subunit |
Conexibacter woesei | 100937 | Cwoe_0436 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Corynebacterium ammoniagenes | 12612 | HMPREF0281_00562 | ring hydroxylating beta subunit |
HMPREF0281_01038 | benzoate 1,2-dioxygenase, small subunit | ||
Corynebacterium callunae | 15359 | H924_10125 | hypothetical protein |
Corynebacterium efficiens | 100395 | CE2306 | putative benzoate 1,2-dioxygenase reductase |
Corynebacterium glutamicum | 12168 | Cgl2405 | Hypothetical protein |
Corynebacterium glutamicum | 12153 | KIQ_00480 | hypothetical protein |
Cupriavidus metallidurans | 102507 | Rmet_4883 | benzoate 1,2-dioxygenase, beta subunit |
Cystobacter fuscus | 100088 | D187_008151 | ring hydroxylating beta subunit family |
Enterobacter aerogenes | 13534 | EAE_02330 | aromatic-ring-hydroxylating dioxygenase subunit beta |
EAE_19890 | benzoate 1,2-dioxygenase, small subunit | ||
Escherichia coli | 3972 | EcolC_1138 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Escherichia coli | 13500 | WFL_13540 | 3-phenylpropionate dioxygenase subunit beta |
Escherichia coli | 12713 | Y75_2532 | 3-phenylpropionate dioxygenase, small (beta) subunit |
Escherichia fergusonii | 102419 | EFER_0799 | Aromatic-ring-hydroxylating dioxygenase, beta subunit |
EFER_1483 | benzoate 1,2-dioxygenase beta subunit | ||
Geodermatophilus obscurus | 13315 | Gobs_1298 | benzoate 1,2-dioxygenase, small subunit |
Gordonia aichiensis | 108223 | GOACH_07_00590 | putative aromatic hydrocarbon dioxygenase small subunit |
GOACH_07_01230 | benzoate 1,2-dioxygenase small subunit | ||
GOACH_29_00250 | putative aromatic hydrocarbon dioxygenase small subunit | ||
Gordonia alkanivorans | 16433 | GOALK_035_00060 | putative aromatic hydrocarbon dioxygenase small subunit |
GOALK_047_00130 | benzoate 1,2-dioxygenase small subunit | ||
Gordonia amicalis | 100051 | GOAMI_40_00480 | benzoate 1,2-dioxygenase small subunit |
Gordonia bronchialis | 16047 | Gbro_4159 | benzoate 1,2-dioxygenase, small subunit |
Gordonia namibiensis | 108229 | GONAM_03_00240 | putative naphthalene dioxygenase small subunit |
GONAM_20_00450 | putative naphthalene dioxygenase small subunit | ||
GONAM_25_00300 | benzoate 1,2-dioxygenase small subunit | ||
Gordonia polyisoprenivorans | 16320 | GOPIP_011_00760 | benzoate 1,2-dioxygenase small subunit |
GOPIP_094_00920 | p-cumate dioxygenase small subunit | ||
Gordonia rhizosphera | 16068 | GORHZ_062_00800 | benzoate 1,2-dioxygenase small subunit |
GORHZ_126_00360 | hypothetical protein | ||
GORHZ_159_00300 | hypothetical protein | ||
GORHZ_171_00300 | hypothetical protein | ||
Gordonia rubripertincta | 101908 | GORBP_002_00140 | putative aromatic hydrocarbon dioxygenase small subunit |
GORBP_060_00760 | benzoate 1,2-dioxygenase small subunit | ||
GORBP_077_00660 | putative aromatic hydrocarbon dioxygenase small subunit | ||
GORBP_095_00100 | benzoate 1,2-dioxygenase small subunit | ||
Gordonia sihwensis | 108236 | GSI01S_20_00080 | putative benzene dioxygenase small subunit |
GSI01S_20_00200 | putative benzene dioxygenase small subunit | ||
Gordonia soli | 108243 | GS4_19_00690 | hypothetical protein |
Gordonia sputi | 100414 | GOSPT_044_00080 | putative aromatic-ring-hydroxylating dioxygenase beta subunit |
GOSPT_141_00320 | benzoate 1,2-dioxygenase small subunit | ||
Gordonia terrae | 100016 | GOTRE_011_00130 | putative aromatic hydrocarbon dioxygenase small subunit |
GOTRE_125_00130 | benzoate 1,2-dioxygenase small subunit | ||
Hylemonella gracilis | 14920 | HGR_01267 | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Klebsiella pneumoniae | 14438 | KPR_2935 | |
Klebsiella pneumoniae subsp. rhinoscleromatis | 105682 | HMPREF0484_4610 | benzoate 1,2-dioxygenase, small subunit |
Ktedonobacter racemifer | Krac_3837 | aromatic-ring-hydroxylating dioxygenase beta subunit | |
Kyrpidia tusciae | 15312 | Btus_2316 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Btus_2902 | aromatic-ring-hydroxylating dioxygenase beta subunit | ||
Labrenzia aggregata | 16684 | SIAM614_30626 | aromatic-ring-hydroxylating dioxygenase, beta subunit |
SIAM614_30826 | Ring hydroxylating beta subunit family protein | ||
Marinomonas mediterranea | 103028 | Marme_1560 | benzoate 1,2-dioxygenase, small subunit |
Marme_2405 | aromatic-ring-hydroxylating dioxygenase beta subunit | ||
Marme_3616 | aromatic-ring-hydroxylating dioxygenase beta subunit | ||
Meiothermus ruber | 106122 | Mrub_2684 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Nitriliruptor alkaliphilus | NitalDRAFT_0748 | 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | |
NitalDRAFT_1727 | 3-phenylpropionate/cinnamic acid dioxygenase, small subunit | ||
NitalDRAFT_4753 | ethylbenzene dioxygenase beta subunit | ||
Nocardiopsis dassonvillei | 14626 | Ndas_4660 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Pseudomonas putida | 100650 | PP_3162 | benzoate dioxygenase, beta subunit |
Pseudomonas stutzeri | 14165 | PSTAB_1579 | benzoate dioxygenase, beta subunit |
Rhodococcus opacus | 108011 | ROP_20990 | benzoate 1,2-dioxygenase small subunit |
ROP_25680 | putative aromatic hydrocarbon dioxygenase small subunit | ||
ROP_46330 | p-cumate dioxygenase small subunit | ||
ROP_71720 | putative aromatic hydrocarbon dioxygenase small subunit | ||
ROP_pROB02-01590 | benzene dioxygenase small subunit | ||
ROP_pROB02-02060 | naphthalene dioxygenase small subunit | ||
Saccharomonospora azurea | 14651 | SacazDRAFT_04277 | small subunit of phenylpropionate dioxygenase |
Saccharomonospora cyanea | 14841 | SaccyDRAFT_1686 | benzoate 1,2-dioxygenase, small subunit |
Saccharopolyspora erythraea | 13426 | SACE_4378 | benzoate 1,2-dioxygenase beta subunit |
Saccharopolyspora spinosa | 15153 | SspiN1_010100027819 | aromatic-ring-hydroxylating dioxygenase subunit beta |
SspiN1_010100036629 | hypothetical protein | ||
Serratia odorifera | 102598 | HMPREF0758_2079 | hypothetical protein |
Shimwellia blattae | 105725 | EB105725_04_00060 | 3-phenylpropionate/cinnamic acid dioxygenase beta subunit |
EB105725_23_00440 | 3-phenylpropionate/cinnamic acid dioxygenase beta subunit | ||
EB105725_26_00450 | putative oxygenase | ||
Sphingobium japonicum | 101211 | SJA_C1-25230 | small subunit of anthranilate dioxygenase |
Sphingobium sp. | 103272 | SLG_16650 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Sphingomonas wittichii | 105917 | Swit_0743 | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Swit_0889 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_0895 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_1532 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_1757 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_1875 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_2635 | 2-chlorobenzoate 1,2-dioxygenase | ||
Swit_3057 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_4175 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_4189 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_4281 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Swit_4896 | aromatic-ring-hydroxylating dioxygenase, beta subunit | ||
Sporichthya polymorpha | 12702 | Spopo_30_02690 | P-cumate dioxygenase small subunit |
Spopo_31_00310 | Beta subunit of hydroxylase component of benzoat e 1,2-dioxygenase | ||
Starkeya novella | 14993 | Snov_2895 | aromatic-ring-hydroxylating dioxygenase beta subunit |
Streptomyces ghanaensis | 15414 | SSFG_07173 | benzoate 1,2-dioxygenase ISP beta subunit |
Thauera linaloolentis | 102519 | C666_10175 | p-cumate dioxygenase small subunit (CmtAc) |
Thermomicrobium roseum | trd_A0340 | 3-phenylpropionate dioxygenase subunit beta (Digoxigenin subunit beta) |
