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遺伝子 : Nitrogenase molybdenum-iron protein alpha chain (NIFD)

遺伝子情報

ID NRULE_0347
遺伝子ID NIFD
作成日 2014/12/19
タンパク質名
Protein name
Full
Nitrogenase molybdenum-iron protein alpha chain
EC
EC 1.18.6.1
Synonym
Full
Dinitrogenase alpha subunit
Nitrogenase component I
遺伝子名 nifD
遺伝子条件 TIGRFAMs; TIGR01282; hit=1
参照
Gene Ontology
GO
GO:0016612, C:molybdenum-iron nitrogenase complex, IEA:InterPro
GO:0005524, F:ATP binding, IEA:UniProtKB-KW
GO:0018697, F:carbonyl sulfide nitrogenase activity, IEA:UniProtKB-EC
GO:0051536, F:iron-sulfur cluster binding, IEA:UniProtKB-KW
GO:0046872, F:metal ion binding, IEA:UniProtKB-KW
GO:0016163, F:nitrogenase activity, IEA:UniProtKB-EC
GO:0009399, P:nitrogen fixation, IEA:UniProtKB-KW
Family and domain databases
InterPro
IPR000510, Nase/OxRdtase_comp1
IPR010143, Nase_comp1_asu
IPR000318, Nase_comp1_CS
IPR005972, Nase_Mo-Fe_asu
Pfam
PF00148, Oxidored_nitro, 1
TIGRFAMs
TIGR01862, N2-ase-Ialpha, 1
TIGR01282, nifD, 1
PROSITE
PS00699, NITROGENASE_1_1, 1
PS00090, NITROGENASE_1_2, 1
配列の特徴 該当データなし
注釈
Function
This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation
Catalytic activity
8 reduced ferredoxin + 8 H(+) + N(2) + 16 ATP + 16 H(2)O = 8 oxidized ferredoxin + H(2) + 2 NH(3) + 16 ADP + 16 phosphate
Subunit structure
Tetramer of two alpha and two beta chains. Forms complex with the iron protein (nitrogenase component 2)
Sequence similarities
Belongs to the NifD/NifK/NifE/NifN family
参考文献
P07328 Azotobacter vinelandii.
649581
Isolation and partial characterization of two different subunits from the molybdenum-iron protein of Azotobacter vinelandii nitrogenase. (J Biol Chem. 1978)
12215645
Nitrogenase MoFe-protein at 1.16 A resolution: a central ligand in the FeMo-cofactor. (Science. 2002)
P08717 Rhodobacter capsulatus (Rhodopseudomonas capsulata).
3557130
A DNA fragment hybridizing to a nif probe in Rhodobacter capsulatus is homologous to a 16S rRNA gene. (Gene. 1986)
G2TDP5
22194448
Identification of a new gene required for the biosynthesis of rhodoquinone in Rhodospirillum rubrum. (J Bacteriol. 2012)
P00466 Klebsiella pneumoniae.
3062178
Nucleotide sequence of a 24,206-base-pair DNA fragment carrying the entire nitrogen fixation gene cluster of Klebsiella pneumoniae. (J Mol Biol. 1988)
3322262
Nucleotide sequence of the Klebsiella pneumoniae nifD gene and predicted amino acid sequence of the alpha-subunit of nitrogenase MoFe protein. (Biochem J. 1987)
P33177 Anabaena sp. (strain L31).
8424961
Cloning and nucleotide sequence of the gene for dinitrogenase reductase (nifH) from the heterocyst-forming cyanobacterium Anabaena sp. L31. (Biochim Biophys Acta. 1993)



関与する機能

機能名
Nitrogenase

該当CDS

データダウンロード
学名 NBRC番号 CDS タンパク質名
Acidithiobacillus ferrooxidansLferr_1239nitrogenase molybdenum-iron protein alpha chain
Azorhizobium caulinodans14845AZC_1040nitrogenase molybdenum-iron protein subunit alpha
Bradyrhizobium diazoefficiens14792blr1743nitrogenase molybdenum-iron protein alpha chain
Calditerrivibrio nitroreducens101217Calni_0685Mo-nitrogenase MoFe protein subunit NifD precursor
Chlorobaculum tepidum103806CT1536nitrogenase molybdenum-iron protein, alpha subunit
Chlorobium limicola103803Clim_0682nitrogenase molybdenum-iron protein alpha chain
Chrysiogenes arsenatisP304_RS0112265nitrogenase molybdenum-iron protein subunit alpha
Clostridium acetobutylicum13948CA_C0256Nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD
Clostridium clariflavum101661Clocl_1264Mo-nitrogenase MoFe protein subunit NifD precursor
Clostridium kluyveri12016CKR_2723hypothetical protein
Coraliomargarita akajimensisCaka_2838nitrogenase molybdenum-iron protein alpha chain
Desulfovibrio magneticus104933DMR_20530nitrogenase molybdenum-iron protein alpha chain nitrogenase component I
Desulfovibrio vulgaris subsp. vulgaris104121DVUA0012nitrogenase molybdenum-iron protein alpha chain
Holophaga foetidaHOLFODRAFT_RS0204550nitrogenase molybdenum-iron protein alpha chain
Magnetospirillum gryphiswaldense15271MGR_1431nitrogenase MoFe protein alpha-subunit
Magnetospirillum magnetotacticum15272Magn03009020COG2710: Nitrogenase molybdenum-iron protein, alpha and beta chains
Methylacidiphilum infernorumMinf_1874Nitrogenase molybdenum-cofactor protein, alpha chain
Nostoc sp.all1454 nifD gene product
Pelobacter carbinolicus103641Pcar_2099nitrogenase molybdenum-iron protein, alpha chain
Pelobacter propionicus103807Ppro_3468Mo-nitrogenase MoFe protein subunit NifD precursor
Rahnella aquatilis105701Rahaq2_5110nitrogenase molybdenum-iron protein alpha chain
Rhizobium etli15573RHE_PD00201nitrogenase, iron-molybdenum alpha chain protein
RHE_PD00307nitrogenase, iron-molybdenum alpha chain protein
Rhizobium sp.101917NGR_a00880nitrogenase molybdenum-iron protein alpha chain NifD2
NGR_a01120nitrogenase molybdenum-iron protein alpha chain NifD1
Rhizobium tropici15247RTCIAT899_PB01570nitrogenase molybdenum-iron protein alpha chain
Rhodobacter capsulatus16581RCAP_rcc00571nitrogenase molybdenum-iron protein alpha chain
Rhodobacter sphaeroides12203RSP_0540Nitrogenase iron-molybdenum protein, alpha chain
Thermodesulfovibrio yellowstoniiTHEYE_A1716nitrogenase molybdenum-iron protein alpha chain
Xenococcus sp.Xen7305DRAFT_00004210nitrogenase molybdenum-iron protein alpha chain
Zymomonas mobilis subsp. pomaceae13757Zymop_1310nitrogenase molybdenum-iron protein alpha chain