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Microbe : Proteus mirabilis

Microbe Description

NBRC No. 105697
Scientific name Proteus mirabilis
Synonymous name Not assigned
History GTC 00137 <- GIFU 3168 <- ATCC 29906 <- CDC PR14
Other culture collection No. ATCC 29906=CCUG 26767=CECT 4168=CIP 103181=DSM 4479=GIFU 3168=GTC 00137=JCM 1669=KCTC 2566=LMG 3257=NCTC 11938
Other No. 4030=CDC PR14
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Acid resistance (by GABA antiporter)(NFUNC_0071)
RequireA
GAD
(NRULE_0231)
Glutamate decarboxylaseHMPREF0693_0980
GADC
(NRULE_0234)
Glutamate/gamma-aminobutyrate antiporterHMPREF0693_0979
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseHMPREF0693_1085 HMPREF0693_1417 HMPREF0693_2890
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseHMPREF0693_1939
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseHMPREF0693_0913 HMPREF0693_0460
TRPE
(NRULE_0143)
Anthranilate synthase component IHMPREF0693_0912
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseHMPREF0693_0741
Arsenical resistance(NFUNC_0004)
RequireA
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinHMPREF0693_1786
ARSC1
(NRULE_0017)
Arsenate reductaseHMPREF0693_1195
Betaine biosynthesis (from choline)(NFUNC_0049)
RequireA
BETA
(NRULE_0175)
Choline dehydrogenaseHMPREF0693_1034
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseHMPREF0693_1957
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseHMPREF0693_1955
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDHMPREF0693_1959 HMPREF0693_0865
BIOB
(NRULE_0185)
Biotin synthaseHMPREF0693_1956
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseHMPREF0693_2081
Folate biosynthesis(NFUNC_0044)
RequireB
GLAT
(NRULE_0142)
Glutamine amidotransferaseHMPREF0693_0913 HMPREF0693_0460
DHPS
(NRULE_0144)
Dihydropteroate synthaseHMPREF0693_2341
FOLA
(NRULE_0147)
Dihydrofolate reductaseHMPREF0693_2551
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseHMPREF0693_2573
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseHMPREF0693_3254
FOLC
(NRULE_0160)
Bifunctional protein FolCHMPREF0693_1429
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IHMPREF0693_1233
PABC
(NRULE_0162)
Aminodeoxychorismate lyaseHMPREF0693_2994
GABA biosynthesis(NFUNC_0066)
RequireA
GAD
(NRULE_0231)
Glutamate decarboxylaseHMPREF0693_0980
Macrolide antibiotic resistance(NFUNC_0045)
RequireB
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseHMPREF0693_1237
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinHMPREF0693_1952 HMPREF0693_1948
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHMPREF0693_1948
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0693_1116 HMPREF0693_3261 HMPREF0693_2620 HMPREF0693_1950 HMPREF0693_1480
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRHMPREF0693_1812 HMPREF0693_1693
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRHMPREF0693_2852
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntRHMPREF0693_0214
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscRHMPREF0693_1507
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0693_1116 HMPREF0693_3261 HMPREF0693_2620 HMPREF0693_1950 HMPREF0693_1480
Participant 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHMPREF0693_1948
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinHMPREF0693_1951
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinHMPREF0693_1952
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseHMPREF0693_3257
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseHMPREF0693_3255
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseHMPREF0693_3349
PANC
(NRULE_0118)
Pantothenate synthetaseHMPREF0693_3256
Polymyxin resistance(NFUNC_0036)
RequireA
ARNA
(NRULE_0132)
Bifunctional polymyxin resistance protein ArnAHMPREF0693_0618
ARNB
(NRULE_0133)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferaseHMPREF0693_0616
ARNC
(NRULE_0134)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferaseHMPREF0693_0617
ARND
(NRULE_0135)
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnDHMPREF0693_0619
ARNE
(NRULE_0136)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnEHMPREF0693_0621
ARNF
(NRULE_0137)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnFHMPREF0693_0622
ARNT
(NRULE_0138)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferaseHMPREF0693_0620 HMPREF0693_3176
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseHMPREF0693_2566
RIBA
(NRULE_0201)
GTP cyclohydrolase-2HMPREF0693_0892
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDHMPREF0693_3369
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseHMPREF0693_3368
RIBE
(NRULE_0204)
Riboflavin synthaseHMPREF0693_0975
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFHMPREF0693_3434
Streptomycin resistance(NFUNC_0054)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseHMPREF0693_1939
Uptake of osmoprotectant(NFUNC_0061)
RequireA
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinHMPREF0693_3765
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinHMPREF0693_3764
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinHMPREF0693_3763
C
BCCT
(NRULE_0220)
BCCT family transporterHMPREF0693_3204 HMPREF0693_2800 HMPREF0693_1037
D
PROP
(NRULE_0221)
Osmoprotectant transporterHMPREF0693_0019
E
OPUE
(NRULE_0222)
Sodium/proline symporterHMPREF0693_1248
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
RequireA
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenaseHMPREF0693_3212
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenaseHMPREF0693_1434
SERC
(NRULE_0210)
Phosphoserine aminotransferaseHMPREF0693_2064
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenaseHMPREF0693_2547
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthaseHMPREF0693_1534

Genomic Overview

BioProject IDPRJNA31523
Locus_tagHMPREF0693
INSDC entriesACLE00000000
Sequence statusWGS
Current status
Contig number115
Size(bp) 3,975,093
Gene 3,812
Finishing goal
Assembly method
Coverage28x
Technology
Reference

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
uncompressed
1.2 MB 1.1 MB 741.6 KB 327.9 KB