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微生物 : Proteus mirabilis

微生物株情報

NBRC番号 105697
学名 Proteus mirabilis
別名（シノニム） 該当データなし
由来 GTC 00137 <- GIFU 3168 <- ATCC 29906 <- CDC PR14
他保存機関番号 ATCC 29906=CCUG 26767=CECT 4168=CIP 103181=DSM 4479=GIFU 3168=GTC 00137=JCM 1669=KCTC 2566=LMG 3257=NCTC 11938
他株番号 4030=CDC PR14
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Acid resistance (by GABA antiporter)(NFUNC_0071)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseHMPREF0693_0980
GADC
(NRULE_0234)
Glutamate/gamma-aminobutyrate antiporterHMPREF0693_0979
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseHMPREF0693_1085 HMPREF0693_1417 HMPREF0693_2890
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseHMPREF0693_1939
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseHMPREF0693_0913 HMPREF0693_0460
TRPE
(NRULE_0143)
Anthranilate synthase component IHMPREF0693_0912
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseHMPREF0693_0741
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinHMPREF0693_1786
ARSC1
(NRULE_0017)
Arsenate reductaseHMPREF0693_1195
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseHMPREF0693_1034
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseHMPREF0693_1957
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseHMPREF0693_1955
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDHMPREF0693_1959 HMPREF0693_0865
BIOB
(NRULE_0185)
Biotin synthaseHMPREF0693_1956
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseHMPREF0693_2081
Folate biosynthesis(NFUNC_0044)
必須B
GLAT
(NRULE_0142)
Glutamine amidotransferaseHMPREF0693_0913 HMPREF0693_0460
DHPS
(NRULE_0144)
Dihydropteroate synthaseHMPREF0693_2341
FOLA
(NRULE_0147)
Dihydrofolate reductaseHMPREF0693_2551
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseHMPREF0693_2573
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseHMPREF0693_3254
FOLC
(NRULE_0160)
Bifunctional protein FolCHMPREF0693_1429
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IHMPREF0693_1233
PABC
(NRULE_0162)
Aminodeoxychorismate lyaseHMPREF0693_2994
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseHMPREF0693_0980
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseHMPREF0693_1237
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinHMPREF0693_1952 HMPREF0693_1948
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHMPREF0693_1948
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0693_1116 HMPREF0693_3261 HMPREF0693_2620 HMPREF0693_1950 HMPREF0693_1480
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRHMPREF0693_1812 HMPREF0693_1693
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRHMPREF0693_2852
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntRHMPREF0693_0214
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscRHMPREF0693_1507
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0693_1116 HMPREF0693_3261 HMPREF0693_2620 HMPREF0693_1950 HMPREF0693_1480
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHMPREF0693_1948
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinHMPREF0693_1951
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinHMPREF0693_1952
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseHMPREF0693_3257
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseHMPREF0693_3255
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseHMPREF0693_3349
PANC
(NRULE_0118)
Pantothenate synthetaseHMPREF0693_3256
Polymyxin resistance(NFUNC_0036)
必須A
ARNA
(NRULE_0132)
Bifunctional polymyxin resistance protein ArnAHMPREF0693_0618
ARNB
(NRULE_0133)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferaseHMPREF0693_0616
ARNC
(NRULE_0134)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferaseHMPREF0693_0617
ARND
(NRULE_0135)
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnDHMPREF0693_0619
ARNE
(NRULE_0136)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnEHMPREF0693_0621
ARNF
(NRULE_0137)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnFHMPREF0693_0622
ARNT
(NRULE_0138)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferaseHMPREF0693_0620 HMPREF0693_3176
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseHMPREF0693_2566
RIBA
(NRULE_0201)
GTP cyclohydrolase-2HMPREF0693_0892
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDHMPREF0693_3369
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseHMPREF0693_3368
RIBE
(NRULE_0204)
Riboflavin synthaseHMPREF0693_0975
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFHMPREF0693_3434
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseHMPREF0693_1939
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinHMPREF0693_3765
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinHMPREF0693_3764
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinHMPREF0693_3763
C
BCCT
(NRULE_0220)
BCCT family transporterHMPREF0693_3204 HMPREF0693_2800 HMPREF0693_1037
D
PROP
(NRULE_0221)
Osmoprotectant transporterHMPREF0693_0019
E
OPUE
(NRULE_0222)
Sodium/proline symporterHMPREF0693_1248
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenaseHMPREF0693_3212
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenaseHMPREF0693_1434
SERC
(NRULE_0210)
Phosphoserine aminotransferaseHMPREF0693_2064
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenaseHMPREF0693_2547
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthaseHMPREF0693_1534

ゲノム配列情報

BioProject IDPRJNA31523
ローカスタグHMPREF0693
INSDC entriesACLE00000000
ステータスWGS
解析状況
コンティグ数115
サイズ(bp) 3,975,093
遺伝子数 3,812
フィニッシングゴール
アセンブル方法
冗長度28x
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
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1.2 MB 1.1 MB 741.6 KB 327.9 KB