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Microbe : Bacillus licheniformis

Microbe Description

NBRC No. 12195
Scientific name Bacillus licheniformis
Synonymous name Not assigned
History IFO 12195 <- NCIB 6346 <- NCTC 6346 <- ATCC 9800 <- AMNH 723 <- W.W. Ford, 1
Other culture collection No. ATCC 9789=ATCC 9800=NBRC 12196=NCIB 6346=NCTC 2586=NCTC 6346
Other No. 1=243=AMNH 723=BUCSAV 171=Hankey B13
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseBLi03274 BLi00551
D-allose biosynthesis(NFUNC_0077)
RequireA
LRHI
(NRULE_0242)
L-rhamnose isomeraseBLi03559
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBLi00217
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireA
APH6
(NRULE_0155)
Streptomycin 6-kinaseBLi01512
Ampicillin resistance(NFUNC_0046)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ABLi00280
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseBLi00091
TRPE
(NRULE_0143)
Anthranilate synthase component IBLi02403
Arginine degradation(NFUNC_0074)
RequireA
ARGI
(NRULE_0239)
ArginaseBLi00198 BLi00424
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseBLi02245 BLi03573
B
AZR
(NRULE_0237)
NADPH azoreductaseBLi01002
Arsenical resistance(NFUNC_0004)
RequireB
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinBLi02123
ARSC2
(NRULE_0018)
Arsenate reductaseBLi02122
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBLi03290 BLi01213
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ABLi00280
Betaine biosynthesis (from choline)(NFUNC_0049)
RequireB
GBSB
(NRULE_0176)
Alcohol dehydrogenaseBLi03269
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseBLi03270
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseBLi01924 BLi00768
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseBLi00767
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDBLi00769
BIOB
(NRULE_0185)
Biotin synthaseBLi00770
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseBLi02835
Fosfomycin resistance(NFUNC_0023)
RequireB
FOSB
(NRULE_0099)
Metallothiol transferase FosBBLi01518
Macrolide antibiotic resistance(NFUNC_0045)
RequireE
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBLi00298
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBLi01052
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBLi01154
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRBLi02623
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBLi01154
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBLi01155
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBLi02376
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBLi02378
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBLi01728
PANC
(NRULE_0118)
Pantothenate synthetaseBLi02377
Penicillin resistance(NFUNC_0047)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ABLi00280
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytaseBLi00448
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseBLi02473
RIBA
(NRULE_0201)
GTP cyclohydrolase-2BLi02473
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDBLi02475
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseBLi02472
RIBE
(NRULE_0204)
Riboflavin synthaseBLi02474
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFBLi01892
Streptogramin resistance(NFUNC_0027)
RequireB
VGB
(NRULE_0114)
Virginiamycin B lyaseBLi00263
Streptomycin resistance(NFUNC_0054)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBLi00217
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseBLi01512
Uptake of osmoprotectant(NFUNC_0061)
RequireA
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinBLi02626 BLi03649
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinBLi02627 BLi03648 BLi03650
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinBLi03651 BLi02628
C
BCCT
(NRULE_0220)
BCCT family transporterBLi03157
E
OPUE
(NRULE_0222)
Sodium/proline symporterBLi00375 BLi00728 BLi04059
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBLi00016
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBLi00017

Genomic Overview

BioProject IDPRJNA13082
Locus_tag
INSDC entriesAE017333
Sequence statusComplete
Current status
Contig number1
Size(bp) 4,222,645
Gene 4,172
Finishing goal
Assembly method
Coverage
Technology
Reference
  • The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential. (J Mol Microbiol Biotechnol. 2004) PMID: 15383718

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
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1.3 MB 1.1 MB 799.5 KB 334.1 KB