Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | RAM_03780 |
Alginate degradation(NFUNC_0062) |
必須 | B | ALY (NRULE_0227) | Alginate lyase | RAM_20915 |
n-alkane hydroxylation(NFUNC_0008) |
必須 | B | ALKB (NRULE_0024) | Alkane 1-monooxygenase | RAM_32810 |
C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | RAM_22015 RAM_22025 |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | RAM_22015 RAM_22025 |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | RAM_34595 RAM_10140 RAM_12795 RAM_19825 RAM_20960 RAM_22020 RAM_07965 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | RAM_22030 |
任意 | | RUBA (NRULE_0039) | Rubredoxin | RAM_32810 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RAM_25905 RAM_21860 RAM_21425 RAM_20970 RAM_11215 RAM_12805 RAM_13875 RAM_19150 RAM_38855 RAM_20810 RAM_41075 RAM_38825 RAM_29205 |
D-allose biosynthesis(NFUNC_0077) |
必須 | A | LRHI (NRULE_0242) | L-rhamnose isomerase | RAM_23140 |
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043) |
必須 | A | APH6 (NRULE_0155) | Streptomycin 6-kinase | RAM_23750 RAM_05460 |
Ampicillin resistance(NFUNC_0046) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RAM_18065 RAM_26100 |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | RAM_00235 |
TRPE (NRULE_0143) | Anthranilate synthase component I | RAM_11665 |
Aromatic azo compounds degradation(NFUNC_0073) |
必須 | A | AZOR (NRULE_0236) | FMN-dependent NADH-azoreductase | RAM_24775 RAM_30070 |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | RAM_06125 RAM_23605 RAM_33320 |
Beta-lactam antibiotic resistance(NFUNC_0033) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RAM_18065 RAM_26100 |
Betaine biosynthesis (from choline)(NFUNC_0049) |
必須 | A | BETA (NRULE_0175) | Choline dehydrogenase | RAM_38845 |
Bioplastic degradation(NFUNC_0015) |
必須 | B | PHAZ2 (NRULE_0080) | Poly(3-hydroxyalkanoate) depolymerase | RAM_20645 RAM_19035 RAM_38340 RAM_30165 RAM_30505 |
C | PHAZ3 (NRULE_0088) | Poly(3-hydroxyalkanoate) depolymerase | RAM_33175 |
Ectoine biosynthesis(NFUNC_0056) |
必須 | A | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | RAM_44120 |
ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | RAM_44125 |
ECTC (NRULE_0188) | L-ectoine synthase | RAM_44115 |
GABA biosynthesis(NFUNC_0066) |
必須 | A | GAD (NRULE_0231) | Glutamate decarboxylase | RAM_45505 |
Hydroxyectoine biosynthesis(NFUNC_0057) |
必須 | A | ECTD (NRULE_0189) | Ectoine hydroxylase | RAM_44110 |
任意 | | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | RAM_44120 |
| ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | RAM_44125 |
| ECTC (NRULE_0188) | L-ectoine synthase | RAM_44115 |
Macrolide antibiotic resistance(NFUNC_0045) |
必須 | D | ERE (NRULE_0168) | Erythromycin esterase | RAM_08915 RAM_44465 |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | RAM_03775 RAM_43700 RAM_43685 |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | RAM_22215 RAM_29490 RAM_41060 RAM_43695 RAM_20560 |
F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | RAM_15305 RAM_11515 |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | RAM_43695 RAM_20560 RAM_22215 RAM_29490 RAM_41060 |
任意 | | MODB (NRULE_0325) | Molybdate ABC transporter permease protein | RAM_43690 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | RAM_25625 RAM_44830 |
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | RAM_06135 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | RAM_23300 RAM_37340 |
PANC (NRULE_0118) | Pantothenate synthetase | RAM_44835 |
Penicillin resistance(NFUNC_0047) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | RAM_18065 RAM_26100 |
Phenol degradation(NFUNC_0028) |
必須 | C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | RAM_30725 |
任意 | | FDR2 (NRULE_0057) | Ferredoxin reductase | RAM_22320 RAM_02005 RAM_09290 |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | RAM_10140 RAM_22020 RAM_34595 RAM_07965 RAM_19825 RAM_12795 RAM_20960 |
| MME (NRULE_0033) | Multicomponent monooxygenase effector protein | RAM_22030 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | RAM_21860 RAM_21425 RAM_20970 RAM_20810 RAM_38855 RAM_38825 RAM_29205 RAM_25905 RAM_41075 RAM_11215 RAM_12805 RAM_13875 RAM_19150 |
| FADR1 (NRULE_0101) | NADH-dependent flavin reductase | RAM_12835 RAM_26705 RAM_35210 RAM_36620 RAM_36915 |
Phytic acid hydrolysis(NFUNC_0085) |
必須 | A | PHYT (NRULE_0258) | 3-phytase | RAM_11615 |
Pyrroloquinoline quinone biosynthesis(NFUNC_0020) |
必須 | A | PQQC (NRULE_0092) | Pyrroloquinoline-quinone synthase | RAM_40415 |
任意 | | PQQB (NRULE_0091) | Coenzyme PQQ synthesis protein B | RAM_40430 |
| PQQE (NRULE_0094) | Coenzyme PQQ synthesis protein E | RAM_40425 |
Streptomycin resistance(NFUNC_0054) |
必須 | C | APH6 (NRULE_0155) | Streptomycin 6-kinase | RAM_23750 RAM_05460 |
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037) |
必須 | A | TREY (NRULE_0140) | Maltooligosyl trehalose synthase | RAM_13175 |
TREZ (NRULE_0141) | Malto-oligosyltrehalose trehalohydrolase | RAM_13180 |
任意 | | GLGX (NRULE_0139) | Glycogen debranching enzyme | RAM_13170 RAM_13185 RAM_15565 |
Trehalose biosynthesis (from maltose)(NFUNC_0034) |
必須 | B | TRES (NRULE_0128) | Trehalose synthase | RAM_13195 |
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031) |
必須 | A | TPS (NRULE_0119) | Trehalose-phosphate synthase | RAM_44490 |
TPP (NRULE_0120) | Trehalose-6-phosphate phosphatase | RAM_44495 |
Vancomycin resistance (via D-Ala-D-Lac precursor)(NFUNC_0089) |
必須 | A | VANA (NRULE_0265) | D-alanine--D-lactate ligase | RAM_42565 |
VANH (NRULE_0266) | D-specific alpha-keto acid dehydrogenase | RAM_42570 |
VANX (NRULE_0267) | D-alanyl-D-alanine dipeptidase | RAM_42560 |
任意 | | VANR (NRULE_0284) | Two-component system response regulator VanR | RAM_42550 |
| VANS (NRULE_0290) | Two-component system histidine kinase VanS | RAM_41825 RAM_42555 |
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059) |
必須 | A | PDXS (NRULE_0206) | Pyridoxal biosynthesis lyase PdxS | RAM_27070 |
PDXT (NRULE_0207) | Glutamine amidotransferase subunit PdxT | RAM_27025 |