Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | bll4070 |
n-alkane hydroxylation(NFUNC_0008) |
必須 | A | CYP153 (NRULE_0041) | Cytochrome P450 CYP153 | blr1853 blr7242 blr7243 |
C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | blr3677 blr3679 |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | blr3679 blr3677 |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | blr2392 blr2895 blr3678 bll4816 blr7998 bll3766 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | blr3680 |
任意 | | RUBA (NRULE_0039) | Rubredoxin | bsl6935 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | blr3400 blr2983 bll5204 bll6221 bll6426 bll7609 blr7649 bll7906 blr2485 blr2390 blr0938 bll1070 blr1753 blr4922 blr3358 |
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043) |
必須 | C | APH7 (NRULE_0157) | Hygromycin-B 7''-O-kinase | blr1035 |
Ampicillin resistance(NFUNC_0046) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | bll0941 |
任意 | | BLAD (NRULE_0125) | Beta-lactamase class D | bll5360 |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | bll2091 blr2489 |
TRPE (NRULE_0143) | Anthranilate synthase component I | blr2489 |
Arginine degradation(NFUNC_0074) |
必須 | A | ARGI (NRULE_0239) | Arginase | bll6122 |
Aromatic azo compounds degradation(NFUNC_0073) |
必須 | A | AZOR (NRULE_0236) | FMN-dependent NADH-azoreductase | bll3368 blr5106 |
Arsenical resistance(NFUNC_0004) |
必須 | D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | bll3085 |
ARSC1 (NRULE_0017) | Arsenate reductase | bll3084 |
E | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | bll3085 |
ARSC2 (NRULE_0018) | Arsenate reductase | bll3086 |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | blr0716 |
Beta-lactam antibiotic resistance(NFUNC_0033) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | bll0941 |
D | BLAD (NRULE_0125) | Beta-lactamase class D | bll5360 |
Bioplastic degradation(NFUNC_0015) |
必須 | A | PHAZ1 (NRULE_0023) | Intracellular poly(3-hydroxyalkanoate) depolymerase | blr6703 blr0908 |
B | PHAZ2 (NRULE_0080) | Poly(3-hydroxyalkanoate) depolymerase | bll4997 blr0899 |
Bioplastic synthesis(NFUNC_0001) |
必須 | A | PHAC1 (NRULE_0010) | Poly(3-hydroxyalkanoate) polymerase | bll4360 blr3732 |
任意 | | PHAB (NRULE_0011) | Acetoacetyl-CoA reductase | bll0225 blr3725 |
| PHAP1 (NRULE_0374) | Phasin | bll5555 bll6129 bll7395 blr2887 blr3464 bll5155 |
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010) |
必須 | A | DHAA (NRULE_0050) | Haloalkane dehalogenase | blr1087 |
HAD (NRULE_0051) | (S)-2-haloacid dehalogenase | blr7560 blr4364 |
B | DHAA (NRULE_0050) | Haloalkane dehalogenase | blr1087 |
DEH (NRULE_0075) | Haloacetate dehalogenase | bll7497 |
Hygromycin resistance(NFUNC_0055) |
必須 | A | APH7 (NRULE_0157) | Hygromycin-B 7''-O-kinase | blr1035 |
Macrolide antibiotic resistance(NFUNC_0045) |
必須 | D | ERE (NRULE_0168) | Erythromycin esterase | bll4651 |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | blr1895 bll1780 blr6644 bll6352 blr3917 blr3224 blr2437 blr6953 |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | blr4797 blr6951 blr7099 blr8160 |
H | NIKR (NRULE_0331) | Nickel-responsive transcriptional regulator NikR | bll0699 |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | blr4797 blr7099 blr6951 blr8160 |
任意 | | MODB (NRULE_0325) | Molybdate ABC transporter permease protein | blr8161 blr6952 |
| MODC (NRULE_0326) | Molybdate ABC transporter ATP-binding protein | blr8162 blr6953 bll1780 |
Nitrile hydratase(NFUNC_0002) |
必須 | A | NHAA (NRULE_0001) | Nitrile hydratase subunit alpha | bll4498 |
NHAB (NRULE_0002) | Nitrile hydratase subunit beta | bll4497 |
任意 | | P14K (NRULE_0006) | Nitrile hydratase activator P14K | bll4496 |
| COBW (NRULE_0007) | CobW/P47K family protein | blr3261 bll7303 bll7768 |
Nitrogenase(NFUNC_0094) |
必須 | A | NIFD (NRULE_0347) | Nitrogenase molybdenum-iron protein alpha chain | blr1743 |
NIFK (NRULE_0348) | Nitrogenase molybdenum-iron protein beta chain | blr1744 |
VNFH (NRULE_0353) | Nitrogenase reductase | blr1769 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | blr2096 |
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | blr4048 blr2101 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | bll6396 bll4604 bll0134 blr0117 blr0589 bll3147 |
PANC (NRULE_0118) | Pantothenate synthetase | blr2102 blr5162 |
Penicillin resistance(NFUNC_0047) |
必須 | A | BLAA (NRULE_0122) | Beta-lactamase class A | bll0941 |
B | BLAD (NRULE_0125) | Beta-lactamase class D | bll5360 |
Phenol degradation(NFUNC_0028) |
必須 | C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | blr4222 |
任意 | | FDR1 (NRULE_0032) | Oxygenase electron transfer component | bll4816 bll3766 blr3678 blr2895 blr2392 blr7998 |
| MME (NRULE_0033) | Multicomponent monooxygenase effector protein | blr3680 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | blr2983 blr3358 blr3400 blr4922 bll5204 bll6221 bll6426 bll7609 blr7649 bll7906 blr2485 blr2390 blr1753 bll1070 blr0938 |
| FADR1 (NRULE_0101) | NADH-dependent flavin reductase | blr7290 blr1238 blr2425 blr3324 blr3331 blr3398 bll3439 bll6095 bll7007 |
Pyrroloquinoline quinone biosynthesis(NFUNC_0020) |
必須 | A | PQQC (NRULE_0092) | Pyrroloquinoline-quinone synthase | blr6737 |
任意 | | PQQA (NRULE_0090) | Coenzyme PQQ synthesis protein A | bsr6735 |
| PQQB (NRULE_0091) | Coenzyme PQQ synthesis protein B | blr6736 |
| PQQD (NRULE_0093) | Coenzyme PQQ synthesis protein D | blr6738 |
| PQQE (NRULE_0094) | Coenzyme PQQ synthesis protein E | blr6739 |
Riboflavin biosynthesis(NFUNC_0058) |
必須 | A | RIBB (NRULE_0200) | 3,4-dihydroxy-2-butanone 4-phosphate synthase | blr2615 |
RIBA (NRULE_0201) | GTP cyclohydrolase-2 | blr7237 blr2615 |
RIBD (NRULE_0202) | Riboflavin biosynthesis protein RibD | bll5031 |
RIBH (NRULE_0203) | 6,7-dimethyl-8-ribityllumazine synthase | bll5029 bll7452 |
RIBE (NRULE_0204) | Riboflavin synthase | bll5030 |
任意 | | RIBF (NRULE_0205) | Riboflavin biosynthesis protein RibF | blr7480 |
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037) |
必須 | A | TREY (NRULE_0140) | Maltooligosyl trehalose synthase | blr6771 |
TREZ (NRULE_0141) | Malto-oligosyltrehalose trehalohydrolase | blr6770 |
任意 | | GLGX (NRULE_0139) | Glycogen debranching enzyme | blr6769 |
Trehalose biosynthesis (from maltose)(NFUNC_0034) |
必須 | B | TRES (NRULE_0128) | Trehalose synthase | blr6767 |