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微生物 : Azorhizobium caulinodans

微生物株情報

NBRC番号 14845
学名 Azorhizobium caulinodans
別名（シノニム） 該当データなし
由来 IFO 14845 <- Lab. Microbiol. & Microbial Genet., Belgium <- B. Dreyfus, ORS 571
他保存機関番号 ATCC 43989=CCUG 26647=DSM 5975=IAM 13624=JCM 20966=LMG 6465
他株番号 ORS 571
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseAZC_4216 AZC_2065
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AAZC_4278
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseAZC_2207
TRPE
(NRULE_0143)
Anthranilate synthase component IAZC_2208
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseAZC_1287
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinAZC_1272
ARSC1
(NRULE_0017)
Arsenate reductaseAZC_1271 AZC_4550
B
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinAZC_1272
ARSC2
(NRULE_0018)
Arsenate reductaseAZC_1270
任意 
ARSH
(NRULE_0021)
ArsH proteinAZC_1274
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseAZC_4674
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AAZC_4278
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseAZC_1183
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymeraseAZC_0295 AZC_4691
Bioplastic synthesis(NFUNC_0001)
必須A
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymeraseAZC_1845
任意 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductaseAZC_0305
 
PHAP1
(NRULE_0374)
PhasinAZC_2250
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinAZC_1791 AZC_1054 AZC_2370
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorAZC_1791
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinAZC_0922 AZC_2368
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinAZC_0922 AZC_2368
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorAZC_1791
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinAZC_2369
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinAZC_2370
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alphaAZC_3797
NHAB
(NRULE_0002)
Nitrile hydratase subunit betaAZC_3798
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14KAZC_3796
 
COBW
(NRULE_0007)
CobW/P47K family proteinAZC_0565 AZC_3934 AZC_3800 AZC_1103 AZC_1001
Nitrogenase(NFUNC_0094)
必須A
NIFD
(NRULE_0347)
Nitrogenase molybdenum-iron protein alpha chainAZC_1040
NIFK
(NRULE_0348)
Nitrogenase molybdenum-iron protein beta chainAZC_1039
VNFH
(NRULE_0353)
Nitrogenase reductaseAZC_1041 AZC_3443
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AAZC_4278
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseAZC_4189
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentAZC_1174 AZC_1372
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinAZC_3406 AZC_3427 AZC_3501 AZC_3662 AZC_1173
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseAZC_2984 AZC_0716 AZC_2489 AZC_3159 AZC_4190
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitAZC_1442
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitAZC_1443
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomeraseAZC_1441
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylaseAZC_1444
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonaseAZC_1444 AZC_2343 AZC_3458
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AAZC_0994
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BAZC_0995
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseAZC_0996
B
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitAZC_1442
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitAZC_1443
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomeraseAZC_1441
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylaseAZC_1444
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit AAZC_0994
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit BAZC_0995
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolaseAZC_0996
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseAZC_3102
RIBA
(NRULE_0201)
GTP cyclohydrolase-2AZC_3102 AZC_4172
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDAZC_1263
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseAZC_1265
RIBE
(NRULE_0204)
Riboflavin synthaseAZC_1264
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFAZC_0098
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseAZC_1404
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseAZC_1403
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeAZC_2750
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseAZC_4115
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseAZC_0482
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseAZC_0483

ゲノム配列情報

BioProject IDPRJNA58905
ローカスタグ
INSDC entriesNC_009937
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 5,369,772
遺伝子数 4,717
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Involvement of the azorhizobial chromosome partition gene (parA) in the onset of bacteroid differentiation during Sesbania rostrata stem nodule development. (Appl Environ Microbiol. 2011) PMID: 21571889

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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