Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | GOPIP_001_01590 |
n-alkane hydroxylation(NFUNC_0008) |
必須 | A | CYP153 (NRULE_0041) | Cytochrome P450 CYP153 | GOPIP_007_00470 GOPIP_035_00030 |
C | MMA (NRULE_0027) | Multicomponent monooxygenase alpha subunit | GOPIP_061_00440 GOPIP_061_00420 |
MMB (NRULE_0028) | Multicomponent monooxygenase beta subunit | GOPIP_061_00440 GOPIP_061_00420 |
FDR1 (NRULE_0032) | Oxygenase electron transfer component | GOPIP_044_00690 GOPIP_057_00230 GOPIP_061_00430 GOPIP_064_00240 GOPIP_094_00370 GOPIP_011_01710 GOPIP_004_01190 GOPIP_006_00860 GOPIP_007_00470 GOPIP_011_00750 GOPIP_028_00250 GOPIP_028_00330 GOPIP_028_00510 GOPIP_031_00820 GOPIP_036_00230 GOPIP_039_00850 |
MME (NRULE_0033) | Multicomponent monooxygenase effector protein | GOPIP_061_00410 |
任意 | | FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | GOPIP_081_00100 GOPIP_064_00230 GOPIP_059_00810 GOPIP_044_00520 GOPIP_039_01230 GOPIP_031_00830 GOPIP_031_02060 GOPIP_030_00100 GOPIP_011_00770 GOPIP_094_00300 GOPIP_094_00950 GOPIP_094_00720 GOPIP_094_00420 GOPIP_094_00960 |
D-allose biosynthesis(NFUNC_0077) |
必須 | A | LRHI (NRULE_0242) | L-rhamnose isomerase | GOPIP_031_00420 |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | GOPIP_019_00660 |
TRPE (NRULE_0143) | Anthranilate synthase component I | GOPIP_071_00060 |
Arsenical resistance(NFUNC_0004) |
必須 | D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | GOPIP_025_01110 |
ARSC1 (NRULE_0017) | Arsenate reductase | GOPIP_064_00160 |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | GOPIP_077_00150 GOPIP_070_00610 GOPIP_054_00700 |
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017) |
必須 | A | BENA (NRULE_0046) | Benzoate 1,2-dioxygenase alpha subunit | GOPIP_011_00770 |
BENB (NRULE_0047) | Benzoate 1,2-dioxygenase beta subunit | GOPIP_011_00760 |
BEND (NRULE_0082) | 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase | GOPIP_011_00750 |
任意 | | BENC (NRULE_0055) | Benzoate 1,2-dioxygenase electron transfer component | GOPIP_011_00750 |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | GOPIP_061_00430 GOPIP_057_00230 GOPIP_044_00690 GOPIP_004_01190 GOPIP_006_00860 GOPIP_007_00470 GOPIP_011_01710 GOPIP_011_00750 GOPIP_028_00250 GOPIP_028_00330 GOPIP_028_00510 GOPIP_031_00820 GOPIP_036_00230 GOPIP_039_00850 GOPIP_094_00370 GOPIP_064_00240 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | GOPIP_094_00950 GOPIP_011_00770 GOPIP_030_00100 GOPIP_031_02060 GOPIP_031_00830 GOPIP_039_01230 GOPIP_044_00520 GOPIP_059_00810 GOPIP_064_00230 GOPIP_081_00100 GOPIP_094_00960 GOPIP_094_00420 GOPIP_094_00720 GOPIP_094_00300 |
| FDR2 (NRULE_0057) | Ferredoxin reductase | GOPIP_094_00970 GOPIP_031_00270 GOPIP_035_00020 GOPIP_084_00770 |
Ectoine biosynthesis(NFUNC_0056) |
必須 | A | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | GOPIP_070_00710 |
ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | GOPIP_070_00730 |
ECTC (NRULE_0188) | L-ectoine synthase | GOPIP_070_00700 |
GABA biosynthesis(NFUNC_0066) |
必須 | A | GAD (NRULE_0231) | Glutamate decarboxylase | GOPIP_021_00180 |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | GOPIP_031_03530 GOPIP_060_00450 GOPIP_085_00400 GOPIP_011_01680 GOPIP_031_03560 |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | GOPIP_060_00420 GOPIP_031_03540 |
F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | GOPIP_032_00320 |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | GOPIP_060_00420 GOPIP_031_03540 |
任意 | | MODB (NRULE_0325) | Molybdate ABC transporter permease protein | GOPIP_031_03550 |
(R)-pantothenate biosynthesis(NFUNC_0030) |
必須 | A | PAND (NRULE_0115) | Aspartate 1-decarboxylase | GOPIP_077_01470 |
PANB (NRULE_0116) | 3-methyl-2-oxobutanoate hydroxymethyltransferase | GOPIP_059_01150 |
PANE (NRULE_0117) | 2-dehydropantoate 2-reductase | GOPIP_075_00770 GOPIP_028_00660 |
PANC (NRULE_0118) | Pantothenate synthetase | GOPIP_077_01460 |
Phenol degradation(NFUNC_0028) |
必須 | B | PHEA1 (NRULE_0083) | Aromatic ring hydroxylase | GOPIP_097_00460 GOPIP_001_00430 |
C | PHEA2 (NRULE_0084) | Aromatic ring hydroxylase | GOPIP_093_00410 GOPIP_092_00690 |
任意 | | FDR2 (NRULE_0057) | Ferredoxin reductase | GOPIP_035_00020 GOPIP_094_00970 GOPIP_084_00770 GOPIP_031_00270 |
| FDR1 (NRULE_0032) | Oxygenase electron transfer component | GOPIP_028_00250 GOPIP_064_00240 GOPIP_094_00370 GOPIP_057_00230 GOPIP_044_00690 GOPIP_039_00850 GOPIP_036_00230 GOPIP_031_00820 GOPIP_028_00510 GOPIP_028_00330 GOPIP_007_00470 GOPIP_011_00750 GOPIP_011_01710 GOPIP_061_00430 GOPIP_004_01190 GOPIP_006_00860 |
| MME (NRULE_0033) | Multicomponent monooxygenase effector protein | GOPIP_061_00410 |
| FDX1 (NRULE_0034) | Putative Rieske-type ferredoxin | GOPIP_094_00960 GOPIP_081_00100 GOPIP_064_00230 GOPIP_059_00810 GOPIP_044_00520 GOPIP_039_01230 GOPIP_031_02060 GOPIP_094_00720 GOPIP_030_00100 GOPIP_011_00770 GOPIP_031_00830 GOPIP_094_00300 GOPIP_094_00950 GOPIP_094_00420 |
| FADR1 (NRULE_0101) | NADH-dependent flavin reductase | GOPIP_005_00300 GOPIP_001_00420 GOPIP_007_00410 GOPIP_031_00230 GOPIP_028_00020 GOPIP_039_01260 GOPIP_043_00560 GOPIP_055_00010 GOPIP_062_00280 GOPIP_087_01510 |
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037) |
必須 | A | TREY (NRULE_0140) | Maltooligosyl trehalose synthase | GOPIP_059_00030 |
TREZ (NRULE_0141) | Malto-oligosyltrehalose trehalohydrolase | GOPIP_059_00130 |
任意 | | GLGX (NRULE_0139) | Glycogen debranching enzyme | GOPIP_059_00020 |
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031) |
必須 | A | TPS (NRULE_0119) | Trehalose-phosphate synthase | GOPIP_087_02380 |
TPP (NRULE_0120) | Trehalose-6-phosphate phosphatase | GOPIP_087_02370 |
Uptake of osmoprotectant(NFUNC_0061) |
必須 | C | BCCT (NRULE_0220) | BCCT family transporter | GOPIP_032_00270 |
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059) |
必須 | A | PDXS (NRULE_0206) | Pyridoxal biosynthesis lyase PdxS | GOPIP_056_00160 |
PDXT (NRULE_0207) | Glutamine amidotransferase subunit PdxT | GOPIP_056_00210 |