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遺伝子 : L-rhamnose isomerase (LRHI)

遺伝子情報

ID NRULE_0242
遺伝子ID LRHI
作成日 2013/09/03
タンパク質名
Protein name
Full
L-rhamnose isomerase
遺伝子名 該当データなし
遺伝子条件 TIGRFAMs; TIGR02629; hit=1
OR
TIGRFAMs; TIGR02635; hit=1
参照
Family and domain databases
InterPro
IPR013022, Xyl_isomerase-like_TIM-brl
配列の特徴
Q75WH8 Pseudomonas stutzeri (Pseudomonas perfectomarina).
METAL219Cobalt 1.
METAL219Copper 1.
METAL219Manganese 1.
METAL219Zinc 1.
METAL254Cobalt 1.
METAL254Copper 1.
METAL254Manganese 1.
METAL254Zinc 1.
METAL257Cobalt 2; via tele nitrogen.
METAL257Copper 2; via tele nitrogen.
METAL257Copper 3; via tele nitrogen.
METAL257Manganese 2; via tele nitrogen.
METAL257Manganese 3; via tele nitrogen.
METAL257Zinc 2; via tele nitrogen.
METAL257Zinc 3; via tele nitrogen.
METAL281Cobalt 1; via pros nitrogen.
METAL281Copper 1; via pros nitrogen.
METAL281Manganese 1; via pros nitrogen.
METAL281Zinc 1; via pros nitrogen.
METAL289Cobalt 2.
METAL289Copper 2.
METAL289Copper 3.
METAL289Manganese 2.
METAL289Manganese 3.
METAL289Zinc 2.
METAL289Zinc 3.
METAL291Cobalt 2.
METAL291Copper 2.
METAL291Copper 3.
METAL291Manganese 3.
METAL291Zinc 2.
METAL291Zinc 3.
METAL327Cobalt 1.
METAL327Copper 1.
METAL327Manganese 1.
METAL327Zinc 1.
注釈
Catalytic activity
L-rhamnose = L-rhamnulose
Cofactor
Binds 1 manganese ion per subunit (By similarity)
参考文献
Q75WH8 Pseudomonas stutzeri (Pseudomonas perfectomarina).
15184124
Cloning, nucleotide sequence, and overexpression of the L-rhamnose isomerase gene from Pseudomonas stutzeri in Escherichia coli. (Appl Environ Microbiol. 2004)
17141803
The structures of L-rhamnose isomerase from Pseudomonas stutzeri in complexes with L-rhamnose and D-allose provide insights into broad substrate specificity. (J Mol Biol. 2007)
Q9X0G0 Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099).
10360571
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. (Nature. 1999)



関与する機能

機能名
D-allose biosynthesis

該当CDS

データダウンロード
学名 NBRC番号 CDS タンパク質名
Acidiphilium multivorum100883ACMV_33310putative L-rhamnose isomerase
Actinoalloteichus cyanogriseus14455G443_18_00920L-rhamnose isomerase-like protein
Actinoalloteichus spitiensis102582ACTIDRAF_05950rhamnose isomerase
Actinomadura atramentaria14695G339_26950rhamnose isomerase
Actinoplanes missouriensis102363AMIS_37470putative sugar isomerase
Actinosynnema mirum14064Amir_3045L-rhamnose isomerase
Alicyclobacillus acidocaldarius subsp. acidocaldarius15652Aaci_0706L-rhamnose isomerase
Amycolatopsis mediterranei13415RAM_23140L-rhamnose isomerase-like protein
Arthrobacter globiformis12137ARGLB_008_00910putative L-rhamnose isomerase
Bacillus licheniformis12200BL00813putative xylose isomerase
Bacillus licheniformis12195BLi03559putative sugar isomerase
Beutenbergia cavernae16432Bcav_3624L-rhamnose isomerase
Caldilinea aerophila104270CLDAP_40140L-rhamnose isomerase
Catenulispora acidiphila102108Caci_6712L-rhamnose isomerase
Cellulomonas fimi15513Celf_3011L-rhamnose isomerase
Celf_3308L-rhamnose isomerase
Dictyoglomus turgidumDtur_0427L-rhamnose isomerase
Gordonia amarae15530GOAMR_20_01560L-rhamnose isomerase
Gordonia polyisoprenivorans16320GOPIP_031_00420L-rhamnose isomerase
Gordonia rhizosphera16068GORHZ_245_00530L-rhamnose isomerase
Gordonia terrae100016GOTRE_040_00290L-rhamnose isomerase
Kineococcus radiotolerans101839Krad_1387L-rhamnose isomerase
Kribbella flavida14399Kfla_0261L-rhamnose isomerase
Ktedonobacter racemiferKrac_4278L-rhamnose isomerase
Labrenzia aggregata16684SIAM614_17824putative sugar isomerase protein
Limnochorda pilosa110152LIP_0554sugar isomerase
Meiothermus silvanus106475Mesil_2856L-rhamnose isomerase
Microlunatus phosphovorus101784MLP_09670putative L-rhamnose isomerase
Nocardiopsis dassonvillei14626Ndas_2382L-rhamnose isomerase
Ochrobactrum anthropi15819Oant_3573L-rhamnose catabolism isomerase
Ochrobactrum intermedium15820OINT_2000663L-rhamnose catabolism isomerase
Paenibacillus peoriae15541PpeoK3_010100007076rhamnose isomerase like protein
Paenibacillus polymyxa15309PPT_11655sugar isomerase
Propionibacterium acidipropionici12425PACID_06580L-rhamnose isomerase
Rhizobium etli15573RHE_PE00292putative sugar isomerase protein
Rhizobium sp.101917NGR_c02420L-rhamnose isomerase
Rhizobium tropici15247RTCIAT899_PC02900L-rhamnose catabolism isomerase
Roseobacter denitrificans15277RD1_3084conserved hypothetical protein
Roseobacter litoralis15278RLO149_c023140L-rhamnose catabolism isomerase RhaI
Rubrobacter xylanophilus100952Rxyl_1680Rhamnose isomerase related
Saccharomonospora cyanea14841SaccyDRAFT_4868L-rhamnose isomerase
Saccharopolyspora erythraea13426SACE_4105xylose isomerase
Sanguibacter keddieii16158Sked_05810L-rhamnose isomerase
Stackebrandtia nassauensis102104Snas_3703L-rhamnose isomerase
Streptomyces avermitilis14893SAV7415putative sugar isomerase
Streptomyces ghanaensis15414SSFG_00600sugar isomerase
Streptomyces pristinaespiralis13074SSDG_01074sugar isomerase
Streptomyces sviceus13980SSEG_04705L-rhamnose catabolism isomerase
Streptomyces venezuelae13096SVEN_6655Predicted L-rhamnose isomerase RhaI
Streptosporangium roseum3776Sros_0428L-rhamnose isomerase
Thermotoga maritima100826TM_1071sugar isomerase
Thermotoga naphthophila104846Tnap_1696L-rhamnose isomerase
Thermotoga neapolitana107923CTN_1498Sugar isomerase
Thermotoga petrophila104847Tpet_1673L-rhamnose isomerase
Xylanimonas cellulosilytica107835Xcel_0886L-rhamnose isomerase
Zimmermannella faecalis15706G328_05680rhamnose isomerase