| Dacrymyces sp. | RD010390, RD010391, RD010392, RD010393, RD010394, RD010395, RD010396, RD010397, RD010461, RD010462, RD010623, RD010624, RD012667 |
| Dacryopinax sp. | RD010482, RD010483 |
| Dactylaria sp. | RD000981, RD001012, RD002289, RD051272, RD051415, RD051461, RD051908, RD052088, RD052216, RD052419, RD052469, RD052478, RD052653, RD052679, RD052684, RD053080, RD054049 |
| Dactylella sp. | RD051560, RD051937, RD051987, RD052052, RD052084, RD052109, RD052864, RD052942, RD053073, RD053095, RD053108, RD053171, RD069265 |
| Dactylellina sp. | RD069267, RD069283 |
| Dactylidina sp. | RD051906 |
| Dactylonectria sp. | RD053754 |
| Dactylosporangium sp. | RD003815, RD003817, RD004153, RD004175, RD004177, RD004292, RD004308, RD004310, RD004878, RD004926, RD004935, RD005062, RD005081, RD005088, RD005093, RD005144, RD005174, RD005209, RD005211, RD005252, RD005254, RD005272, RD005276, RD005277, RD005299, RD005327, RD005331, RD005400, RD006157, RD006788, RD006801, RD006803, RD007162, RD007585, RD007786, RD007920, RD007925, RD007932, RD008395, RD008411, RD008527, RD008569, RD008610, RD008619, RD008716, RD010750, RD010788, RD011039, RD011041, RD011046, RD011053, RD011056, RD011065, RD011088, RD011092, RD011118, RD011388, RD062821, RD062835, RD064522, RD064564, RD064578, RD064579, RD064592, RD064601, RD064609, RD066228, RD066299, RD066375, RD066554, RD066558, RD067324, RD067325, RD067327, RD067328, RD067332, RD067341, RD067342, RD067343, RD067344, RD067345, RD067360, RD067422, RD067429, RD067567 |
| Daedalea sp. | RD010335, RD010529, RD010618, RD010638 |
| Daedaleopsis sp. | RD010644, RD053999 |
| Daldinia sp. | RD000254, RD056481, RD056534, RD057739, RD057997, RD058596, RD059053, RD059322 |
| Dasania sp. | RD002609 |
| Datronia sp. | RD010443, RD010444 |
| Debaryomyces sp. | RD009336, RD009804, RD011868, RD011946, RD011950, RD011972, RD011975, RD012012, RD012019, RD012021, RD012069, RD012443, RD012474, RD012479, RD012484, RD012490, RD012492, RD012494, RD012498, RD012501, RD014442, RD014443, RD014444, RD014445, RD051093, RD055094 |
| Deconica sp. | RD012785, RD055686 |
| Delftia sp. | RD009046 |
| Delitschia sp. | RD054253, RD055876, RD056052, RD056673, RD057757, RD059402, RD059609, RD060133, RD061252 |
| Dematipyriforma sp. | RD002302, RD054163, RD057327, RD057575 |
| Dematophora sp. | RD015348 |
| Demequina sp. | RD000625, RD000654, RD003120, RD003178, RD010864, RD012638 |
| Deminuibacter sp. | RD003581, RD003584 |
| Dendrocorticium sp. | RD010648 |
| Dendrophoma sp. | RD003337 |
| Dendrostoma sp. | RD001948, RD054097 |
| Dendryphiella sp. | RD051338, RD051354, RD051764, RD051799, RD051817, RD051856, RD051895, RD051897, RD051920, RD052425, RD052639, RD052641, RD052642, RD052647, RD052749, RD052872, RD053110, RD053125, RD053127, RD053134, RD053138, RD053142, RD053144, RD053248 |
| Dendryphion sp. | RD000956, RD051828, RD051829, RD051836, RD051939, RD052024, RD052039, RD052160, RD052163, RD052164, RD052185, RD052210, RD052361, RD052435, RD052509, RD052715, RD052825, RD052880, RD052889, RD054380, RD054387 |
| Dendryphiopsis sp. | RD013221 |
| Dermabacter sp. | RD014512 |
| Dermacoccus sp. | RD008913, RD008914, RD012559, RD012618, RD012992, RD014513, RD014514 |
| Derxomyces sp. | RD051064, RD051068, RD051075, RD051099, RD051100, RD051110 |
| Desarmillaria sp. | RD012705, RD012706 |
| Devosia sp. | RD006382, RD008802, RD008803, RD011444, RD012558, RD013363 |
| Devriesia sp. | RD000494, RD003325, RD051923, RD052020, RD059756 |
| Diabolocovidia sp. | RD052763 |
| Dialonectria sp. | RD052640, RD052648 |
| Diaminobutyricibacter sp. | RD001805, RD011393, RD011395 |
| Diaminobutyricimonas sp. | RD000808, RD001754 |
| Diaporthe sp. | RD000357, RD002140, RD002165, RD002171, RD002206, RD002223, RD002225, RD002228, RD002279, RD005804, RD009754, RD010330, RD015213, RD015214, RD015219, RD015228, RD015231, RD015243, RD015262, RD015268, RD015284, RD015322, RD015341, RD015345, RD015357, RD015360, RD015361, RD051876, RD052017, RD053588, RD054020, RD054061, RD054135, RD054171, RD054221, RD054431, RD054491, RD054515, RD054727, RD054804, RD054877, RD054886, RD055438, RD056859, RD056984, RD057031, RD057032, RD057055, RD057056, RD057080, RD057088, RD057959, RD057966, RD057967, RD058061, RD058118, RD058131, RD058135, RD058716, RD060008, RD060473, RD060604, RD060852, RD061179 |
| Dicephalospora sp. | RD010488, RD055146 |
| Dichostereum sp. | RD005907 |
| Dichotomopilus sp. | RD005874, RD050293, RD055203, RD055879, RD056111, RD057344, RD057349, RD057364, RD057556, RD057581, RD057587, RD057663, RD058161, RD058168, RD058173, RD058871, RD058878, RD058911, RD058926, RD058951, RD059186, RD059449, RD059616, RD059702, RD059911, RD060244, RD060637, RD060641, RD060719, RD060895, RD069199, RD069225 |
| Dicranidion sp. | RD052986, RD058528 |
| Dictyoarthrinium sp. | RD057588, RD057819 |
| Dictyochaeta sp. | RD000980, RD001011, RD009998, RD010078, RD051341, RD053018, RD053026, RD053316, RD057042, RD057043, RD058468, RD060333 |
| Dictyocheirospora sp. | RD055110 |
| Dictyosporium sp. | RD055964 |
| Didymella sp. | RD000481, RD000492, RD000506, RD000538, RD002281, RD003363, RD009622, RD009859, RD010026, RD010049, RD013153, RD050485, RD050536, RD050556, RD050557, RD050561, RD050562, RD050563, RD050606, RD050608, RD050610, RD050614, RD050622, RD050635, RD050639, RD050641, RD050652, RD050661, RD050680, RD050696, RD050699, RD050713, RD050718, RD050729, RD050733, RD050736, RD050737, RD050756, RD050760, RD050775, RD050785, RD050789, RD050797, RD050800, RD051918, RD053531, RD056078, RD056344, RD056394, RD056772, RD056830, RD056854, RD057003, RD057054, RD057864, RD057920, RD058847, RD059004, RD059176, RD060881 |
| Didymosphaeria sp. | RD000458, RD001156, RD002286, RD015304, RD053540, RD053701, RD053840, RD057104, RD057122, RD057134, RD058034, RD058040, RD061017, RD061020, RD061073 |
| Diederichomyces sp. | RD053632, RD053648, RD054250, RD054572, RD054882, RD057038 |
| Dielma sp. | RD014905 |
| Dietzia sp. | RD006135, RD012623, RD012625, RD012635, RD012637 |
| Dinemasporium sp. | RD051968, RD051984, RD053130 |
| Dinghuibacter sp. | RD002453 |
| Dioszegia sp. | RD012061, RD012389, RD050995, RD051080, RD051112, RD051122 |
| Diplocladiella sp. | RD013261 |
| Diplococcium sp. | RD000984, RD053912, RD053946 |
| Diplodia sp. | RD000461, RD054138 |
| Diplogelasinospora sp. | RD009780, RD059706 |
| Diplomitoporus sp. | RD001049, RD002545, RD002546, RD050953, RD054700 |
| Discosia sp. | RD003371, RD009837, RD010106, RD053562, RD054014, RD054015, RD054017, RD054753, RD054893, RD056966, RD056967, RD056987, RD060208 |
| Disporotrichum sp. | RD055712, RD058222 |
| Dissoconium sp. | RD054513 |
| Distoseptispora sp. | RD051429, RD051552, RD052054, RD052058, RD052276, RD052330, RD052442, RD052492, RD052511, RD052635, RD052643, RD052676, RD052992, RD052993, RD053039, RD053040, RD053094, RD053120, RD053185, RD053191, RD053281, RD053282, RD053284, RD053933, RD053958 |
| Diutina sp. | RD014446 |
| Dorea sp. | RD014894, RD015142 |
| Dothidea sp. | RD003378 |
| Dothiora sp. | RD012029, RD012045 |
| Dothiorella sp. | RD000264, RD000406, RD000407 |
| Drechmeria sp. | RD001017, RD003328, RD056055 |
| Drechslera sp. | RD052018 |
| Drechslerella sp. | RD051441, RD053082, RD053103 |
| Duganella sp. | RD003587, RD008763 |
| Dyella sp. | RD000025, RD000026, RD000032, RD000033, RD000034, RD000035, RD000036, RD000037, RD000038, RD000039, RD000040, RD000041, RD000042, RD000043, RD000044, RD000730, RD000735, RD000745, RD000746, RD000757, RD000810, RD000815, RD000823, RD000827, RD001712, RD001751, RD001777, RD001800, RD001804, RD001821, RD001822, RD001823, RD001824, RD001825, RD001832, RD002451, RD002460, RD002461, RD002922, RD004392 |
