| Species name | RD No. |
|---|
| Yamadamyces sp. | RD009840, RD011708 |
| Yamadazyma sp. | RD011971, RD014483, RD055086 |
| Yeosuana sp. | RD001647 |
| Yimella sp. | RD012641 |
| Yinghuangia sp. | RD004224, RD008915, RD062025, RD062100, RD063186, RD064352, RD064414, RD066067, RD066300, RD068617 |
| Yoonia sp. | RD000720, RD000721, RD000875, RD000883, RD001716, RD002001, RD002758, RD002829, RD003108, RD003111, RD006400 |
| Youhaiella sp. | RD001856 |
