| Haemophilus sp. | RD014943 |
| Hafnia sp. | RD014419 |
| Halarcobacter sp. | RD002655 |
| Halobacillus sp. | RD012983, RD012985 |
| Halomonas sp. | RD000558, RD000570, RD000571, RD011252, RD011254, RD012959, RD012962, RD012963, RD012965, RD012967 |
| Hamadaea sp. | RD004004 |
| Hamigera sp. | RD011535, RD050291, RD055829, RD056208, RD056262, RD056510, RD056524, RD057333, RD057399, RD057522, RD057530, RD057595, RD059357, RD059750, RD059967, RD069190 |
| Hannaella sp. | RD008844, RD009877, RD010050, RD011597, RD011598, RD011599, RD011602, RD011610, RD011978, RD012027, RD012031, RD012210, RD012399, RD012402, RD015486, RD015491, RD015492, RD015522, RD051063 |
| Hanseniaspora sp. | RD008849, RD011260, RD011495, RD011502, RD011508, RD011514, RD011879, RD011882, RD011883, RD011888, RD011893, RD011899, RD011902, RD011907, RD011922, RD011934, RD011954, RD011955, RD011964, RD011966, RD011982, RD011987, RD011991, RD011998, RD012007, RD012202, RD013495, RD013496, RD013497, RD013498, RD013499, RD013500, RD013501, RD015558, RD015560, RD015561, RD015565, RD055020, RD055030, RD055037, RD055038, RD055044, RD055045, RD055069, RD055363, RD055365, RD055393 |
| Hansfordia sp. | RD051278, RD051280, RD051282, RD051300, RD051313, RD051320, RD051324, RD051326, RD051335, RD051359, RD051365, RD051389, RD051394, RD051468, RD051765, RD051812, RD053022, RD053051 |
| Harzia sp. | RD051233, RD051393, RD051484, RD052158, RD052319, RD052341, RD052869, RD052888, RD052946, RD053782 |
| Hawksworthiomyces sp. | RD061053 |
| Helicodendron sp. | RD013223 |
| Helicoma sp. | RD005794, RD013242, RD013243, RD052071, RD055406, RD069287 |
| Helicomyces sp. | RD013218, RD013241 |
| Helicosporium sp. | RD001018, RD013229, RD013232, RD013244, RD013245, RD013251, RD013255, RD052116 |
| Heliimonas sp. | RD000837 |
| Hellea sp. | RD000860 |
| Helminthosporium sp. | RD051504, RD051838, RD051875, RD051965, RD051990, RD051995, RD052043, RD052044, RD052100, RD052101, RD052159, RD052199, RD052204, RD052327, RD052881, RD052940, RD053133 |
| Hendersonia sp. | RD054567 |
| Hephaestia sp. | RD001727 |
| Herbiconiux sp. | RD000191, RD000196, RD003586, RD009028, RD066634 |
| Herbidospora sp. | RD006687, RD007116, RD007809, RD008613, RD011050, RD067104, RD068600, RD068669 |
| Herminiimonas sp. | RD008760 |
| Heterobasidion sp. | RD001955, RD010321, RD010378, RD010420, RD010421, RD010651, RD010652 |
| Heterocephalacria sp. | RD011607 |
| Heterochaete sp. | RD010448, RD010449 |
| Heterocorticium sp. | RD010554, RD010555 |
| Heterogastridium sp. | RD057932, RD057939 |
| Hexagonia sp. | RD010583, RD010584, RD054866 |
| Heyndrickxia sp. | RD015665, RD015666, RD015693 |
| Hirsutella sp. | RD000960, RD001122, RD001140, RD053513 |
| Holdemanella sp. | RD014906 |
| Holtermanniella sp. | RD015509 |
| Holwaya sp. | RD010502, RD010503 |
| Hoppeia sp. | RD003088 |
| Hormiactis sp. | RD051459, RD051500 |
| Hortaea sp. | RD055446, RD061191, RD061312 |
| Humibacter sp. | RD000820, RD000830, RD000831, RD000832, RD000833, RD000834, RD000835 |
| Humicola sp. | RD003364, RD005835, RD005864, RD005918, RD009065, RD009162, RD009194, RD009245, RD009288, RD009289, RD009545, RD009547, RD009607, RD009612, RD009687, RD009737, RD009890, RD009984, RD010067, RD011522, RD012423, RD012436, RD012819, RD053265, RD053334, RD053348, RD053352, RD053357, RD053368, RD053370, RD053394, RD053398, RD053477, RD053479, RD053489, RD053498, RD053566, RD053568, RD053576, RD053586, RD053613, RD053615, RD053620, RD053627, RD053633, RD053753, RD053781, RD053800, RD053827, RD053919, RD053976, RD054217, RD054224, RD054261, RD054266, RD054381, RD054382, RD054423, RD054432, RD054481, RD054510, RD054544, RD054546, RD054578, RD054579, RD054583, RD054584, RD054649, RD054673, RD054747, RD054756, RD054757, RD054768, RD054770, RD054771, RD054772, RD054814, RD054836, RD055723, RD055728, RD055786, RD056001, RD056015, RD056159, RD056167, RD056173, RD056239, RD056246, RD056311, RD056336, RD056345, RD056381, RD056450, RD056493, RD056500, RD056508, RD056529, RD056531, RD056604, RD056610, RD056742, RD056775, RD056804, RD056932, RD057184, RD057233, RD057234, RD057524, RD058050, RD058247, RD058376, RD058381, RD058395, RD058396, RD058555, RD058566, RD058858, RD058915, RD058937, RD058953, RD059006, RD059019, RD059024, RD059035, RD059073, RD059103, RD059210, RD059216, RD059221, RD059222, RD059223, RD059231, RD059284, RD059309, RD059316, RD059429, RD059559, RD059634, RD059691, RD059713, RD059729, RD059744, RD059837, RD059844, RD059846, RD059847, RD059848, RD059927, RD059966, RD060124, RD060179, RD060242, RD060248, RD060287, RD060428, RD060563, RD060573, RD060582, RD060583, RD060584, RD060587, RD060612, RD060626, RD060627, RD060629, RD060633, RD060661, RD060683, RD060704, RD060708, RD060710, RD060711, RD060730, RD060733, RD060736, RD060757, RD060770, RD060772, RD060776, RD060783, RD060788, RD060797, RD060811, RD060818, RD060826, RD060840, RD060875, RD061002, RD061019, RD061027, RD069212, RD069219, RD069227, RD069230 |
| Humicolopsis sp. | RD009187, RD010125, RD050410, RD051091 |
| Hungatella sp. | RD014220, RD014221, RD014222, RD014223, RD014225, RD014226, RD014889 |
| Hyalodendriella sp. | RD050875 |
| Hyalopeziza sp. | RD001979 |
| Hyaloscypha sp. | RD003376, RD010544, RD010545 |
| Hydnochaete sp. | RD010381, RD010382, RD010522, RD010523 |
| Hydnophlebia sp. | RD054838, RD056687 |
| Hydropisphaera sp. | RD050394, RD052662, RD052886, RD054032, RD054088, RD055101 |
| Hydrotalea sp. | RD000018, RD000019, RD000847, RD000848 |
| Hymenochaete sp. | RD010613, RD055207 |
| Hymenopellis sp. | RD010442 |
| Hymenoscyphus sp. | RD001939, RD009608, RD010619, RD052140, RD069333 |
| Hyphodontia sp. | RD010425, RD010514, RD010515, RD010590, RD010591, RD010630, RD010631, RD010633, RD010655, RD010656 |
| Hyphomicrobium sp. | RD011440, RD012642, RD013356 |
| Hyphomonas sp. | RD003472 |
| Hyphomucor sp. | RD055426, RD055427 |
| Hyphopichia sp. | RD055049, RD055091, RD055092 |
| Hyphozyma sp. | RD012485, RD012503 |
| Hypocopra sp. | RD015308 |
| Hypocrea sp. | RD001117, RD050393, RD055181 |
| Hypomontagnella sp. | RD054025 |
| Hypomyces sp. | RD001125, RD003369, RD010406, RD054734, RD057886, RD057912, RD057927 |
| Hypoxylon sp. | RD009370, RD009789, RD009925, RD050306, RD053473, RD053770, RD053807, RD054493, RD054495, RD054586, RD054600, RD056676, RD057723, RD057738, RD057750, RD057783, RD057792, RD057802, RD057804, RD057811, RD057816, RD057842, RD057953, RD058023, RD058025, RD058411, RD058558, RD058629, RD058831, RD059512, RD060210, RD060754, RD060974, RD061010, RD061025 |
| Hyunsoonleella sp. | RD001676, RD002649, RD002670, RD002671, RD006406 |
