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遺伝子 : Choline dehydrogenase (BETA)

遺伝子情報

ID NRULE_0175
遺伝子ID BETA
作成日 2013/03/27
タンパク質名
Protein name
Full
Choline dehydrogenase
Short
CDH
CHD
EC
EC 1.1.99.1
遺伝子名 betA
遺伝子条件 TIGRFAMs; TIGR01810; hit=1
参照
Gene Ontology
GO
GO:0016020, C:membrane, IDA:EcoCyc
GO:0005886, C:plasma membrane, IEA:UniProtKB-SubCell
GO:0008812, F:choline dehydrogenase activity, IDA:EcoCyc
GO:0050660, F:flavin adenine dinucleotide binding, IEA:InterPro
GO:0019285, P:glycine betaine biosynthetic process from choline, IMP:EcoCyc
GO:0006970, P:response to osmotic stress, IMP:EcoCyc
Phylogenomic databases
eggNOG
COG2303, -
HOGENOM
HOG000139600, -
KO
K00108, -
Enzyme and pathway databases
BioCyc
MetaCyc:CHD-MONOMER, -
UniPathway
UPA00529, UER00385
Family and domain databases
HAMAP
MF_00750, Choline_dehydrogen, 1, -
InterPro
IPR011533, Choline_dehydrogenase
IPR012132, GMC_OxRdtase
IPR000172, GMC_OxRdtase_N
IPR007867, GMC_OxRtase_C
Pfam
PF05199, GMC_oxred_C, 1
PF00732, GMC_oxred_N, 1
PIRSF
PIRSF000137, Alcohol_oxidase, 1
TIGRFAMs
TIGR01810, betA, 1
PROSITE
PS00623, GMC_OXRED_1, 1
PS00624, GMC_OXRED_2, 1
配列の特徴
P17444 Escherichia coli (strain K12).
CHAIN1 - 556Choline dehydrogenase. /FTId=PRO_0000205586.
NP_BIND4 - 33FAD (Probable).
ACT_SITE473By similarity.
注釈
Function
Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Catalytic activity
Choline + acceptor = betaine aldehyde + reduced acceptor
Cofactor
FAD
Pathway
Amine and polyamine biosynthesis; betaine biosynthesis via choline pathway; betaine aldehyde from choline (cytochrome c reductase route): step 1/1
Sequence similarities
Belongs to the GMC oxidoreductase family
参考文献
P17444 Escherichia coli (strain K12).
3512525
Choline-glycine betaine pathway confers a high level of osmotic tolerance in Escherichia coli. (J Bacteriol. 1986)
E1V8W8 Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9).
10708384
Genes for the synthesis of the osmoprotectant glycine betaine from choline in the moderately halophilic bacterium Halomonas elongata DSM 3043, USA. (Microbiology (Reading). 2000)



関与する機能

機能名
Betaine biosynthesis (from choline)

該当CDS

データダウンロード
学名 NBRC番号 CDS タンパク質名
Acetobacter aceti14818AaceN1_010100013172choline dehydrogenase
Acidiphilium multivorum100883ACMV_08960choline dehydrogenase
Acinetobacter radioresistens102413ACRAD_02_02350choline dehydrogenase
Acinetobacter sp.100985ACT4_021_00420choline dehydrogenase
Actinopolyspora iraqiensis103187ACTIR_664_00130choline dehydrogenase
Alteromonas macleodii102226MASE_13425choline dehydrogenase
Amycolatopsis mediterranei13415RAM_38845choline dehydrogenase
Arthrobacter globiformis12137ARGLB_073_00040choline dehydrogenase
Austwickia chelonae105200AUCHE_21_00530putative choline dehydrogenase
Azorhizobium caulinodans14845AZC_1183choline dehydrogenase
Corynebacterium striatum15291HMPREF0308_2352choline dehydrogenase
Enterobacter aerogenes13534EAE_13515choline dehydrogenase
Enterobacter cloacae subsp. cloacae13535ECL_03123choline dehydrogenase
Enterobacter hormaechei105718HMPREF9086_1260choline dehydrogenase
Escherichia coli3972EcolC_3312choline dehydrogenase
Escherichia coli13500WFL_01890choline dehydrogenase
Escherichia coli12713Y75_0302choline dehydrogenase, a flavoprotein
Geodermatophilus obscurus13315Gobs_1710choline dehydrogenase
Halobacillus halophilus102448HBHAL_1450choline dehydrogenase
Halomonas elongata15536HELO_1859choline dehydrogenase BetA
Kineosphaera limosa100340KILIM_037_00080putative choline dehydrogenase
Klebsiella pneumoniae14438KPR_3975
Klebsiella pneumoniae subsp. rhinoscleromatis105682HMPREF0484_1573choline dehydrogenase
Labrenzia aggregata16684SIAM614_05120choline dehydrogenase
Marinomonas mediterranea103028Marme_0467Choline dehydrogenase
Microlunatus phosphovorus101784MLP_20680choline dehydrogenase
Mobilicoccus pelagius104925MOPEL_098_00120putative choline dehydrogenase
Nitriliruptor alkaliphilusNitalDRAFT_0555choline dehydrogenase
Ochrobactrum anthropi15819Oant_2709choline dehydrogenase
Ochrobactrum intermedium15820OINT_1000607choline dehydrogenase
Phaeobacter gallaeciensis16654PGA1_c21660choline dehydrogenase BetA
Propionibacterium acidipropionici12425PACID_07730Choline dehydrogenase
Proteus mirabilis105697HMPREF0693_1034choline dehydrogenase
Providencia alcalifaciens105687PROVALCAL_00577choline dehydrogenase
Pseudomonas putida100650PP_5064choline dehydrogenase
Pseudomonas stutzeri14165PSTAB_1640choline dehydrogenase
Rahnella aquatilis105701Rahaq2_1449choline dehydrogenase
Rhizobium etli15573RHE_CH01136choline dehydrogenase (CHD) protein
Rhizobium sp.101917NGR_b04630predicted Choline dehydrogenase BetA
NGR_c06990choline dehydrogenase
Rhizobium tropici15247RTCIAT899_CH04945choline dehydrogenase
Rhodobacter capsulatus16581RCAP_rcc00898choline dehydrogenase
Rhodobacter sphaeroides12203RSP_2184Choline dehydrogenase
Roseobacter denitrificans15277RD1_2024choline dehydrogenase
Roseobacter litoralis15278RLO149_c011700choline dehydrogenase BetA
Saccharomonospora azurea14651SacazDRAFT_01917choline dehydrogenase
Saccharomonospora cyanea14841SaccyDRAFT_4218choline dehydrogenase
Saccharomonospora glauca14831SacglDRAFT_03539choline dehydrogenase
Saccharomonospora viridis12207Svir_31690choline dehydrogenase
Salinispora arenicola105043Q5S_1081_00020choline dehydrogenase
Salinispora tropica105044Strop_1639choline dehydrogenase
Serratia odorifera102598HMPREF0758_4630choline dehydrogenase
Stackebrandtia nassauensis102104Snas_2397choline dehydrogenase
Staphylococcus epidermidis12993SE_2165choline dehydrogenase
Staphylococcus saprophyticus subsp. saprophyticus102446SSP0196choline dehydrogenase
Starkeya novella14993Snov_3029choline dehydrogenase
Streptomyces sviceus13980SSEG_05612choline dehydrogenase
Streptosporangium roseum3776Sros_3854choline dehydrogenase
Vibrio alginolyticus15630N646_4062choline dehydrogenase
Vibrio metschnikovii103153VIB_000018choline dehydrogenase
Vibrio orientalis15638VIOR3934_13542choline dehydrogenase
Vibrio tubiashii15644VITU9109_11112choline dehydrogenase
Vibrio vulnificus15645B736_17620choline dehydrogenase