| Vagococcus silagei | NBRC 113536T |
| Valsa ceratosperma | NBRC 30252 |
| Vanderwaltozyma japonica | NBRC 11072, NBRC 11076, NBRC 11078T, NBRC 11080, NBRC 116645, NBRC 116646, NBRC 116647 |
| Vanderwaltozyma polyspora | NBRC 0996, NBRC 10782T |
| Vanderwaltozyma tropicalis | NBRC 105213, NBRC 105214T |
| Vanderwaltozyma verrucispora | NBRC 1884T, NBRC 1885, NBRC 103676 |
| Vanderwaltozyma yarrowii | NBRC 10314, NBRC 10607, NBRC 10608T |
| Vanrija fragicola | NBRC 100667T |
| Varicosporina prolifera | NBRC 32119, NBRC 32120, NBRC 100413T |
| Varicosporina ramulosa | NBRC 31325T, NBRC 32163 |
| Varicosporium elodeae | NBRC 106753 |
| Variovorax boronicumulans | NBRC 103145T, NBRC 110657, NBRC 110658 |
| Variovorax humicola | NBRC 111520T |
| Variovorax paradoxus | NBRC 15149T, NBRC 15150, NBRC 108632 |
| Variovorax rhizosphaerae | NBRC 112307T |
| Variovorax robiniae | NBRC 112308T |
| Variovorax soli | NBRC 106424T |
| Variovorax sp. | NBRC 108627 |
| Variovorax ureilyticus | NBRC 112306T |
| Vascellum curtisii | NBRC 106584 |
| Vasilyevaea enhydra | NBRC 102409T |
| Veluticeps angularis | NBRC 30304, NBRC 30305 |
| Venturia inaequalis | NBRC 6451, NBRC 9937, NBRC 9938 |
| Venturia nashicola | NBRC 8777 |
| Venturia pirina | NBRC 6189, NBRC 6455 |
| Venturiocistella japonica | NBRC 106633 |
| Veronaea botryosa | NBRC 9452, NBRC 109680, NBRC 109681, NBRC 109682, NBRC 109683, NBRC 109684, NBRC 109685 |
| Veronaea japonica | NBRC 105257 |
| Verruculina enalia | NBRC 32497, NBRC 32498 |
| Verticicladium trifidum | NBRC 8844, NBRC 9094, NBRC 100550, NBRC 102300 |
| Verticillium alboatrum | NBRC 31023 |
| Verticillium cephalosporum | NBRC 102326 |
| Verticillium dahliae | NBRC 5916, NBRC 5922, NBRC 6119, NBRC 6126, NBRC 6150, NBRC 9435, NBRC 9470, NBRC 9765, NBRC 9939, NBRC 31024, NBRC 112174, NBRC 112175, NBRC 112176, NBRC 112177, NBRC 112178, NBRC 112179 |
| Verticillium fungicola var. fungicola | NBRC 8578 |
| Verticillium lecanii | NBRC 8579, NBRC 32311, NBRC 32312, NBRC 32313, NBRC 32314, NBRC 32315, NBRC 100718, NBRC 101475, NBRC 101476 |
| Verticillium leptobactrum | NBRC 32274 |
| Verticillium niveostratosum | NBRC 5435, NBRC 6625 |
| Verticillium psalliotae | NBRC 30618, NBRC 30619, NBRC 32275, NBRC 100836 |
| Verticillium suchlasporium var. catenatum | NBRC 32276 |
| Verticillium tricorpus | NBRC 31025 |
| Vibrio aestuarianus | NBRC 15629T |
| Vibrio albensis | NBRC 101273, NBRC 101274, NBRC 101275, NBRC 101276 |
| Vibrio alginolyticus | NBRC 15630T, NBRC 15930 |
| Vibrio algivorus | NBRC 111146T |
| Vibrio algoinfesta | NBRC 14665, NBRC 14666 |
| Vibrio azureus | NBRC 104587T, NBRC 104588 |
| Vibrio campbellii | NBRC 15631T, NBRC 105237, NBRC 105238, NBRC 105239, NBRC 105240, NBRC 113564 |
| Vibrio chagasii | NBRC 110950 |
| Vibrio comitans | NBRC 102076T, NBRC 102077, NBRC 102078, NBRC 102079, NBRC 102080, NBRC 102081 |
| Vibrio cyclitrophicus | NBRC 107756T |
| Vibrio diazotrophicus | NBRC 103148T |
| Vibrio equitatus | NBRC 103149 |
| Vibrio ezurae | NBRC 102218T |
| Vibrio fluvialis | NBRC 103150T |
| Vibrio gazogenes | NBRC 103151T |
| Vibrio halioticoli | NBRC 102217T |
| Vibrio harveyi | NBRC 15632, NBRC 15634T, NBRC 101064, NBRC 113563 |
| Vibrio hyugaensis | NBRC 110633T |
| Vibrio ichthyoenteri | NBRC 15846, NBRC 15847T, NBRC 15848 |
| Vibrio inusitatus | NBRC 102082T, NBRC 102083 |
| Vibrio jasicida | NBRC 110949 |
| Vibrio mediterranei | NBRC 15635T |
| Vibrio metschnikovii | NBRC 103153T |
| Vibrio natriegens | NBRC 15636T |
| Vibrio nereis | NBRC 15637T |
| Vibrio orientalis | NBRC 15638T |
| Vibrio parahaemolyticus | NBRC 12711T, NBRC 115971 |
| Vibrio penaeicida | NBRC 15640T, NBRC 15641, NBRC 15642 |
| Vibrio proteolyticus | NBRC 13287T |
| Vibrio rarus | NBRC 102084T |
| Vibrio sagamiensis | NBRC 104589T, NBRC 104590 |
| Vibrio sp. | NBRC 101060, NBRC 101065, NBRC 101804, NBRC 101805, NBRC 101806, NBRC 101807, NBRC 101893, NBRC 108142, NBRC 114112, NBRC 114113 |
| Vibrio splendidus | NBRC 101061 |
| Vibrio superstes | NBRC 103154T |
| Vibrio tapetis | NBRC 101062 |
| Vibrio tubiashii | NBRC 15644T |
| Vibrio vulnificus | NBRC 15645T, NBRC 103022, NBRC 103023, NBRC 103024, NBRC 103025, NBRC 103026 |
| Vibrio zhanjiangensis | NBRC 108723T |
| Vibrissea sp. | NBRC 113636 |
| Virgaria nigra | NBRC 9238, NBRC 9453, NBRC 32656 |
| Virgibacillus halodenitrificans | NBRC 102361T |
| Virgibacillus indicus | NBRC 113014T |
| Virgibacillus pantothenticus | NBRC 102447T |
| Virgibacillus profundi | NBRC 113015T |
| Virgibacillus sp. | NBRC 102404, NBRC 114104, NBRC 116129, NBRC 116130 |
| Virgisporangium aliadipatigenens | NBRC 105643, NBRC 105644T |
| Virgisporangium aurantiacum | NBRC 16421T |
| Virgisporangium myanmarense | NBRC 112733T |
| Virgisporangium ochraceum | NBRC 16418T, NBRC 16419, NBRC 16420, NBRC 105359 |
| Viridispora alata | NBRC 104916 |
| Vishniacozyma dimennae | NBRC 1863T |
| Vishniacozyma globispora | NBRC 10753T |
| Vishniacozyma penaeus | NBRC 0930T |
| Vishniacozyma sp. | NBRC 114176, NBRC 114177, NBRC 114748, NBRC 114749, NBRC 114750, NBRC 114751 |
| Vitellibacter todarodis | NBRC 113025T |
| Vogesella urethralis | NBRC 113779T |
| Volutella buxi | NBRC 6003 |
| Volutella ciliata | NBRC 9151, NBRC 100728 |
| Volutina concentrica | NBRC 9083, NBRC 9096, NBRC 9097 |
| Volvariella speciosa var. gloiocephala | NBRC 30350 |
| Volvariella volvacea | NBRC 30010, NBRC 31104 |
| Volvox sp. (class: Chlorophyceae) | NBRC 107897, NBRC 107912 |
| Vreelandella maris | NBRC 114670T |
| Vreelandella salicampi | NBRC 109914T |
| Vreelandella subglaciescola | NBRC 14766T |
| Vreelandella utahensis | NBRC 102410T |
| Vreelandella venusta | NBRC 102221T |
| Vuilleminia sp. | NBRC 110369 |
| Vulcanimicrobium alpinus | NBRC 115847T |
| Vulcanisaeta distributa | NBRC 100878T, NBRC 100880, NBRC 100881, NBRC 100882 |
| Vulcanisaeta souniana | NBRC 100879T |
| Vulgatibacter incomptus | NBRC 109945T |
