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推定保有機能 : Rhodobacter capsulatus

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseRCAP_rcc01574
n-alkane hydroxylation(NFUNC_0008)
必須A
CYP153
(NRULE_0041)
Cytochrome P450 CYP153
B
ALKB
(NRULE_0024)
Alkane 1-monooxygenase
C
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
任意 
RUBA
(NRULE_0039)
RubredoxinRCAP_rcc00774
 
RUBB
(NRULE_0040)
Rubredoxin reductase
 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc02768 RCAP_rcc03351
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseRCAP_rcc00040
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinase
D
HPH
(NRULE_0174)
Hygromycin-B 4-O-kinase
Aniline degradation (conversion into catechol)(NFUNC_0075)
必須A
ATDA1
(NRULE_0240)
Gamma-glutamylanilide synthetase
ATDA3
(NRULE_0357)
Aniline dioxygenase large subunit
ATDA4
(NRULE_0358)
Aniline dioxygenase small subunit
任意 
ATDA2
(NRULE_0241)
Putative gamma-glutamylanilide hydrolase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc03351 RCAP_rcc02768
 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseRCAP_rcc02357
TRPE
(NRULE_0143)
Anthranilate synthase component IRCAP_rcc02355
Anthranilate degradation (via hydroxylation)(NFUNC_0018)
必須A
ANTA
(NRULE_0044)
Anthranilate 1,2-dioxygenase large subunit
ANTB
(NRULE_0045)
Anthranilate 1,2-dioxygenase small subunit
任意 
ANTC
(NRULE_0081)
Anthranilate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc03351 RCAP_rcc02768
 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseRCAP_rcc02114
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitRCAP_rcc03351
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc02768 RCAP_rcc03351
 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC1
(NRULE_0017)
Arsenate reductase
B
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC2
(NRULE_0018)
Arsenate reductaseRCAP_rcp00087 RCAP_rcc02070
C
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC3
(NRULE_0019)
Arsenate reductase
D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBRCAP_rcp00080
ARSC1
(NRULE_0017)
Arsenate reductase
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBRCAP_rcp00080
ARSC2
(NRULE_0018)
Arsenate reductaseRCAP_rcp00087 RCAP_rcc02070
F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBRCAP_rcp00080
ARSC3
(NRULE_0019)
Arsenate reductase
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPase
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsD
 
ARSH
(NRULE_0021)
ArsH protein
Artificial lacto-N-biose biosynthesis(NFUNC_0026)
必須A
SP
(NRULE_0109)
Sucrose phosphorylase
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseRCAP_rcc00124
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseRCAP_rcc00164
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunit
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunit
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc02768 RCAP_rcc03351
 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseRCAP_rcc00898
B
GBSB
(NRULE_0176)
Alcohol dehydrogenase
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseRCAP_rcc00897
C
CHOX
(NRULE_0178)
Choline oxidase
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymeraseRCAP_rcc00745
B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymerase
C
PHAZ3
(NRULE_0088)
Poly(3-hydroxyalkanoate) depolymerase
任意 
PHAY
(NRULE_0022)
D-(-)-3-hydroxybutyrate oligomer hydrolase
Bioplastic synthesis(NFUNC_0001)
必須A
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymeraseRCAP_rcc00746
B
PHAE
(NRULE_0012)
Poly(3-hydroxyalkanoate) polymerase PhaE subunit
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunit
C
PHAR
(NRULE_0013)
Poly(3-hydroxyalkanoate) polymerase PhaR subunit
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunit
任意 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductaseRCAP_rcc03179
 
PHAP1
(NRULE_0374)
Phasin
 
PHAP2
(NRULE_0375)
Phasin
 
PHAP3
(NRULE_0376)
PhasinRCAP_rcc00747
 
PHAF
(NRULE_0377)
Phasin PhaF
 
PHAI
(NRULE_0378)
Phasin PhaI
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthase
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseRCAP_rcc03366
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDRCAP_rcc03365
BIOB
(NRULE_0185)
Biotin synthaseRCAP_rcc03363
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104)
必須A
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolase
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseRCAP_rcc02194
CLCE
(NRULE_0384)
Maleylacetate reductase
CLCB
(NRULE_0387)
Chloromuconate cycloisomerase
B
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolase
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolaseRCAP_rcc02194
CLCE
(NRULE_0384)
Maleylacetate reductase
任意 
CLCF
(NRULE_0385)
Chloromuconolactone dehalogenase
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029)
必須A
DSZA
(NRULE_0103)
Dibenzothiophene-5,5-dioxide monooxygenase
DSZB
(NRULE_0104)
2'-hydroxybiphenyl-2-sulfinate desulfinase
DSZC
(NRULE_0105)
Dibenzothiophene monooxygenase
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc03088 RCAP_rcc00005
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011)
必須A
EDIO
(NRULE_0058)
extradiol dioxygenaseRCAP_rcc00816
METAH
(NRULE_0059)
meta-cleavage compound hydrolase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolase
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenase
B
EDIO
(NRULE_0058)
extradiol dioxygenaseRCAP_rcc00816
2HMSD
(NRULE_0060)
2-hydroxymuconic semialdehyde dehydrogenase
4OT
(NRULE_0061)
4-oxalocrotonate tautomerase
4OD
(NRULE_0062)
4-oxalocrotonate decarboxylase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolase
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenase
Extracellular electron transfer system(NFUNC_0098)
必須A
NAPC
(NRULE_0333)
Multiheme c-type cytochromeRCAP_rcc02847
MTRC
(NRULE_0334)
OmcA/MtrC family decaheme c-type cytochrome
MTRA
(NRULE_0335)
MtrA/DmsE family decaheme c-type cytochrome
MTRB
(NRULE_0336)
Outer membrane protein MtrB homolog
Folate biosynthesis(NFUNC_0044)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseRCAP_rcc02357
DHPS
(NRULE_0144)
Dihydropteroate synthaseRCAP_rcc01211
FOLM
(NRULE_0146)
Dihydrofolate reductase FolM
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseRCAP_rcc02419 RCAP_rcc01210
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseRCAP_rcc03319
FOLC
(NRULE_0160)
Bifunctional protein FolCRCAP_rcc00235
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IRCAP_rcc02644
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
B
GLAT
(NRULE_0142)
Glutamine amidotransferaseRCAP_rcc02357
DHPS
(NRULE_0144)
Dihydropteroate synthaseRCAP_rcc01211
FOLA
(NRULE_0147)
Dihydrofolate reductase
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseRCAP_rcc01210 RCAP_rcc02419
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseRCAP_rcc03319
FOLC
(NRULE_0160)
Bifunctional protein FolCRCAP_rcc00235
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IRCAP_rcc02644
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
C
GLAT
(NRULE_0142)
Glutamine amidotransferaseRCAP_rcc02357
DHPS
(NRULE_0144)
Dihydropteroate synthaseRCAP_rcc01211
DFR2
(NRULE_0148)
Dihydrofolate reductase type 2
FOLB
(NRULE_0158)
Dihydroneopterin aldolaseRCAP_rcc02419 RCAP_rcc01210
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinaseRCAP_rcc03319
FOLC
(NRULE_0160)
Bifunctional protein FolCRCAP_rcc00235
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IRCAP_rcc02644
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
Human milk oligosaccharides metabolism(NFUNC_0083)
必須A
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
任意 
NAHK
(NRULE_0256)
N-acetylhexosamine 1-kinase
 
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
 
GALE
(NRULE_0111)
UDP-glucose 4-epimeraseRCAP_rcc00124
4-hydroxyphenylacetate degradation(NFUNC_0068)
必須A
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
B
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
C
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc00005 RCAP_rcc03088
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
D
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc03088 RCAP_rcc00005
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
E
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc03088 RCAP_rcc00005
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
F
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc00005 RCAP_rcc03088
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
G
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
H
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratase
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
Macrolide antibiotic resistance(NFUNC_0045)
必須A
ERM
(NRULE_0164)
rRNA adenine N-6-methyltransferase
B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferase
C
MACA
(NRULE_0166)
Macrolide-specific efflux protein MacA
MACB
(NRULE_0167)
Macrolide export ATP-binding/permease protein MacBRCAP_rcc00357
D
ERE
(NRULE_0168)
Erythromycin esterase
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferase
F
MGT
(NRULE_0170)
Macrolide glycosyltransferase
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinRCAP_rcc03261 RCAP_rcc02025 RCAP_rcc00560 RCAP_rcc00564 RCAP_rcp00150 RCAP_rcc01389 RCAP_rcc00561
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorRCAP_rcc00560 RCAP_rcc00561
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinRCAP_rcc01771 RCAP_rcc02744 RCAP_rcc02219 RCAP_rcc00562
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntR
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueR
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxR
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntR
H
NIKR
(NRULE_0331)
Nickel-responsive transcriptional regulator NikR
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscR
J
SMTA
(NRULE_0009)
Metallothionein
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinRCAP_rcc01771 RCAP_rcc02219 RCAP_rcc02744 RCAP_rcc00562
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorRCAP_rcc00560 RCAP_rcc00561
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinRCAP_rcc00563 RCAP_rcc02218
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinRCAP_rcc00564
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitRCAP_rcc03351
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseRCAP_rcc00816
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAHG
(NRULE_0190)
Salicylate hydroxylase
B
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitRCAP_rcc03351
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenaseRCAP_rcc00816
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAGG
(NRULE_0191)
Salicylate 5-hydroxylase alpha subunit
NAGH
(NRULE_0192)
Salicylate 5-hydroxylase beta subunit
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc02768 RCAP_rcc03351
 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alpha
NHAB
(NRULE_0002)
Nitrile hydratase subunit beta
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14K
 
COBW
(NRULE_0007)
CobW/P47K family proteinRCAP_rcc02379 RCAP_rcc02048
Nitrogenase(NFUNC_0094)
必須A
NIFD
(NRULE_0347)
Nitrogenase molybdenum-iron protein alpha chainRCAP_rcc00571
NIFK
(NRULE_0348)
Nitrogenase molybdenum-iron protein beta chainRCAP_rcc00570
VNFH
(NRULE_0353)
Nitrogenase reductaseRCAP_rcc00585 RCAP_rcc00572
B
ANFD
(NRULE_0344)
Nitrogenase iron-iron protein alpha chainRCAP_rcc00586
ANFK
(NRULE_0345)
Nitrogenase iron-iron protein beta chainRCAP_rcc00588
ANFG
(NRULE_0346)
Nitrogenase iron-iron protein delta chainRCAP_rcc00587
VNFH
(NRULE_0353)
Nitrogenase reductaseRCAP_rcc00585 RCAP_rcc00572
C
VNFD
(NRULE_0349)
Nitrogenase vanadium-iron protein alpha chain
VNFK
(NRULE_0351)
Nitrogenase vanadium-iron protein beta chain
VNFG
(NRULE_0352)
Nitrogenase vanadium-iron protein delta chain
VNFH
(NRULE_0353)
Nitrogenase reductaseRCAP_rcc00572 RCAP_rcc00585
D
VNFK
(NRULE_0350)
Nitrogenase vanadium-iron protein alpha/delta chain
VNFK
(NRULE_0351)
Nitrogenase vanadium-iron protein beta chain
VNFH
(NRULE_0353)
Nitrogenase reductaseRCAP_rcc00585 RCAP_rcc00572
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylase
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseRCAP_rcc00428
PANE
(NRULE_0117)
2-dehydropantoate 2-reductase
PANC
(NRULE_0118)
Pantothenate synthetaseRCAP_rcc00427
Phenol degradation(NFUNC_0028)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylase
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylase
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseRCAP_rcc03412
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
 
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc03351 RCAP_rcc02768
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseRCAP_rcc00005 RCAP_rcc03088
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseRCAP_rcc03075
RIBA
(NRULE_0201)
GTP cyclohydrolase-2RCAP_rcc00262 RCAP_rcc03075
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibD
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseRCAP_rcc03074
RIBE
(NRULE_0204)
Riboflavin synthaseRCAP_rcc03076
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFRCAP_rcc02082
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferase
B
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferase
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseRCAP_rcc00040
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferase
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
FDR1
(NRULE_0032)
Oxygenase electron transfer componentRCAP_rcc03350
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
PCHF
(NRULE_0035)
4-cresol dehydrogenase flavoprotein subunit
PCHC
(NRULE_0036)
4-cresol dehydrogenase cytochrome c subunit
PCHA
(NRULE_0037)
p-hydroxybenzaldehyde dehydrogenase
POBA
(NRULE_0038)
p-hydroxybenzoate hydroxylase
任意 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinRCAP_rcc03351 RCAP_rcc02768
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthase
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolase
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeRCAP_rcc01838
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenase
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenase
SERC
(NRULE_0210)
Phosphoserine aminotransferase
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenaseRCAP_rcc02690
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthaseRCAP_rcc03315