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推定保有機能 : Phaeobacter gallaeciensis

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemasePGA1_c10880
n-alkane hydroxylation(NFUNC_0008)
必須A
CYP153
(NRULE_0041)
Cytochrome P450 CYP153
B
ALKB
(NRULE_0024)
Alkane 1-monooxygenase
C
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c05020 PGA1_c25310 PGA1_262p01350 PGA1_c04040
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
任意 
RUBA
(NRULE_0039)
Rubredoxin
 
RUBB
(NRULE_0040)
Rubredoxin reductase
 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_c34000 PGA1_c05010 PGA1_262p01370
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class APGA1_c09800
任意 
BLAB
(NRULE_0123)
Metallo-beta-lactamase
 
BLAD
(NRULE_0125)
Beta-lactamase class D
Aniline degradation (conversion into catechol)(NFUNC_0075)
必須A
ATDA1
(NRULE_0240)
Gamma-glutamylanilide synthetase
ATDA3
(NRULE_0357)
Aniline dioxygenase large subunit
ATDA4
(NRULE_0358)
Aniline dioxygenase small subunit
任意 
ATDA2
(NRULE_0241)
Putative gamma-glutamylanilide hydrolase
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c04040 PGA1_c05020 PGA1_c25310 PGA1_262p01350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_c34000 PGA1_c05010 PGA1_262p01370
 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferasePGA1_c16880
TRPE
(NRULE_0143)
Anthranilate synthase component IPGA1_c16860
Anthranilate degradation (via hydroxylation)(NFUNC_0018)
必須A
ANTA
(NRULE_0044)
Anthranilate 1,2-dioxygenase large subunit
ANTB
(NRULE_0045)
Anthranilate 1,2-dioxygenase small subunit
任意 
ANTC
(NRULE_0081)
Anthranilate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c04040 PGA1_262p01350 PGA1_c25310 PGA1_c05020
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_262p01370 PGA1_c34000 PGA1_c05010
 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginasePGA1_c16370
Aromatic hydrocarbon degradation (via hydroxylation by dioxygenase)(NFUNC_0016)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitPGA1_c05010 PGA1_262p01370
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c04040 PGA1_c05020 PGA1_c25310 PGA1_262p01350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_262p01370 PGA1_c05010 PGA1_c34000
 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
Arsenical resistance(NFUNC_0004)
必須A
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC1
(NRULE_0017)
Arsenate reductasePGA1_c12140
B
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC2
(NRULE_0018)
Arsenate reductasePGA1_c15000 PGA1_c14990
C
ARSB1
(NRULE_0015)
Arsenical pump membrane protein
ARSC3
(NRULE_0019)
Arsenate reductase
D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsB
ARSC1
(NRULE_0017)
Arsenate reductasePGA1_c12140
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsB
ARSC2
(NRULE_0018)
Arsenate reductasePGA1_c14990 PGA1_c15000
F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsB
ARSC3
(NRULE_0019)
Arsenate reductase
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPase
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsD
 
ARSH
(NRULE_0021)
ArsH proteinPGA1_c24650
Artificial lacto-N-biose biosynthesis(NFUNC_0026)
必須A
SP
(NRULE_0109)
Sucrose phosphorylase
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
GALE
(NRULE_0111)
UDP-glucose 4-epimerasePGA1_c34470
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasePGA1_c36070
Benzoate degradation (via hydroxylation by dioxygenase)(NFUNC_0017)
必須A
BENA
(NRULE_0046)
Benzoate 1,2-dioxygenase alpha subunit
BENB
(NRULE_0047)
Benzoate 1,2-dioxygenase beta subunit
BEND
(NRULE_0082)
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
任意 
BENC
(NRULE_0055)
Benzoate 1,2-dioxygenase electron transfer component
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_262p01350 PGA1_c25310 PGA1_c05020 PGA1_c04040
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_262p01370 PGA1_c05010 PGA1_c34000
 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class APGA1_c09800
B
BLAB
(NRULE_0123)
Metallo-beta-lactamase
C
BLAC
(NRULE_0124)
Beta-lactamase class C
D
BLAD
(NRULE_0125)
Beta-lactamase class D
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenasePGA1_c21660
B
GBSB
(NRULE_0176)
Alcohol dehydrogenase
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenasePGA1_c21670
C
CHOX
(NRULE_0178)
Choline oxidase
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymerasePGA1_c20940
B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymerase
C
PHAZ3
(NRULE_0088)
Poly(3-hydroxyalkanoate) depolymerase
任意 
PHAY
(NRULE_0022)
D-(-)-3-hydroxybutyrate oligomer hydrolase
Bioplastic synthesis(NFUNC_0001)
必須A
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymerasePGA1_c20930
B
PHAE
(NRULE_0012)
Poly(3-hydroxyalkanoate) polymerase PhaE subunit
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunit
C
PHAR
(NRULE_0013)
Poly(3-hydroxyalkanoate) polymerase PhaR subunit
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunit
任意 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductasePGA1_c03390
 
PHAP1
(NRULE_0374)
Phasin
 
PHAP2
(NRULE_0375)
Phasin
 
PHAP3
(NRULE_0376)
PhasinPGA1_c20920
 
PHAF
(NRULE_0377)
Phasin PhaF
 
PHAI
(NRULE_0378)
Phasin PhaI
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthase
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasePGA1_c09150
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDPGA1_c09140
BIOB
(NRULE_0185)
Biotin synthasePGA1_c09120
Catechol degradation (beta-ketoadipate pathway)(NFUNC_0013)
必須A
CATA
(NRULE_0052)
Catechol 1,2-dioxygenase
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomerase
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonasePGA1_c04570
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
B
CATA
(NRULE_0052)
Catechol 1,2-dioxygenase
CATC
(NRULE_0054)
Muconolactone isomerase
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonasePGA1_c04570
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
CATB1
(NRULE_0386)
Muconate cycloisomerase
C
CATA
(NRULE_0052)
Catechol 1,2-dioxygenase
CATC
(NRULE_0054)
Muconolactone isomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
CATB1
(NRULE_0386)
Muconate cycloisomerase
D
CATA
(NRULE_0052)
Catechol 1,2-dioxygenase
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
CATC
(NRULE_0054)
Muconolactone isomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
Cephalosporin resistance(NFUNC_0048)
必須A
BLAC
(NRULE_0124)
Beta-lactamase class C
任意 
BLAA
(NRULE_0122)
Beta-lactamase class APGA1_c09800
 
BLAB
(NRULE_0123)
Metallo-beta-lactamase
Chlorocatechol degradation (beta-ketoadipate pathway)(NFUNC_0104)
必須A
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolasePGA1_c16420
CLCE
(NRULE_0384)
Maleylacetate reductase
CLCB
(NRULE_0387)
Chloromuconate cycloisomerase
B
CATB2
(NRULE_0053)
(Chloro)muconate cycloisomerase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
CLCA
(NRULE_0382)
Chlorocatechol 1,2-dioxygenase
CLCD
(NRULE_0383)
Dienelactone hydrolasePGA1_c16420
CLCE
(NRULE_0384)
Maleylacetate reductase
任意 
CLCF
(NRULE_0385)
Chloromuconolactone dehalogenase
Dibenzothiophene degradation (via desulfurization)(NFUNC_0029)
必須A
DSZA
(NRULE_0103)
Dibenzothiophene-5,5-dioxide monooxygenase
DSZB
(NRULE_0104)
2'-hydroxybiphenyl-2-sulfinate desulfinase
DSZC
(NRULE_0105)
Dibenzothiophene monooxygenase
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c21090 PGA1_c06410 PGA1_c12920 PGA1_c13110
Dihydroxy aromatic compounds degradation (via meta-cleavage pathway)(NFUNC_0011)
必須A
EDIO
(NRULE_0058)
extradiol dioxygenasePGA1_c32210
METAH
(NRULE_0059)
meta-cleavage compound hydrolase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolase
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenase
B
EDIO
(NRULE_0058)
extradiol dioxygenasePGA1_c32210
2HMSD
(NRULE_0060)
2-hydroxymuconic semialdehyde dehydrogenase
4OT
(NRULE_0061)
4-oxalocrotonate tautomerase
4OD
(NRULE_0062)
4-oxalocrotonate decarboxylase
HPDH
(NRULE_0063)
2-hydroxypent-2,4-dienoate hydratase
HOA
(NRULE_0064)
4-hydroxy-2-oxovalerate aldolase
ACDH
(NRULE_0065)
Acetaldehyde dehydrogenase
Folate biosynthesis(NFUNC_0044)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferasePGA1_c16880
DHPS
(NRULE_0144)
Dihydropteroate synthasePGA1_c06540
FOLM
(NRULE_0146)
Dihydrofolate reductase FolM
FOLB
(NRULE_0158)
Dihydroneopterin aldolasePGA1_c06530
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinasePGA1_c00990
FOLC
(NRULE_0160)
Bifunctional protein FolCPGA1_c31680
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IPGA1_c24550
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
B
GLAT
(NRULE_0142)
Glutamine amidotransferasePGA1_c16880
DHPS
(NRULE_0144)
Dihydropteroate synthasePGA1_c06540
FOLA
(NRULE_0147)
Dihydrofolate reductasePGA1_c21170
FOLB
(NRULE_0158)
Dihydroneopterin aldolasePGA1_c06530
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinasePGA1_c00990
FOLC
(NRULE_0160)
Bifunctional protein FolCPGA1_c31680
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IPGA1_c24550
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
C
GLAT
(NRULE_0142)
Glutamine amidotransferasePGA1_c16880
DHPS
(NRULE_0144)
Dihydropteroate synthasePGA1_c06540
DFR2
(NRULE_0148)
Dihydrofolate reductase type 2
FOLB
(NRULE_0158)
Dihydroneopterin aldolasePGA1_c06530
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinasePGA1_c00990
FOLC
(NRULE_0160)
Bifunctional protein FolCPGA1_c31680
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IPGA1_c24550
PABC
(NRULE_0162)
Aminodeoxychorismate lyase
Haloalkane degradation (conversion into hydroxyacid)(NFUNC_0010)
必須A
DHAA
(NRULE_0050)
Haloalkane dehalogenase
HAD
(NRULE_0051)
(S)-2-haloacid dehalogenasePGA1_c04610
B
DHAA
(NRULE_0050)
Haloalkane dehalogenase
DEH
(NRULE_0075)
Haloacetate dehalogenase
Human milk oligosaccharides metabolism(NFUNC_0083)
必須A
LNBP
(NRULE_0112)
1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
任意 
NAHK
(NRULE_0256)
N-acetylhexosamine 1-kinase
 
GALT
(NRULE_0110)
Galactose-1-phosphate uridylyltransferase
 
GALE
(NRULE_0111)
UDP-glucose 4-epimerasePGA1_c34470
4-hydroxyphenylacetate degradation(NFUNC_0068)
必須A
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
B
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenasePGA1_c32210
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
C
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c21090 PGA1_c06410 PGA1_c12920 PGA1_c13110
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
D
HPAB1
(NRULE_0085)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c21090 PGA1_c06410 PGA1_c12920 PGA1_c13110
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenasePGA1_c32210
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
E
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c13110 PGA1_c21090 PGA1_c12920 PGA1_c06410
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenasePGA1_c32210
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
F
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c06410 PGA1_c12920 PGA1_c13110 PGA1_c21090
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
G
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD2
(NRULE_0194)
Homoprotocatechuate 2,3-dioxygenasePGA1_c32210
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
H
HPAB2
(NRULE_0086)
4-hydroxyphenylacetate 3-monooxygenase oxygenase component
HPAC
(NRULE_0102)
4-hydroxyphenylacetate 3-monooxygenase reductase component
HPAD1
(NRULE_0193)
Homoprotocatechuate 2,3-dioxygenase
HPAE
(NRULE_0195)
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenasePGA1_c32220
HPAF
(NRULE_0196)
5-carboxymethyl-2-hydroxymuconate Delta-isomerasePGA1_c32230
HPAG
(NRULE_0197)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase/2-hydroxyhepta-2,4-diene-1,7-dioate Delta-isomerase
HPAH
(NRULE_0198)
2-oxo-hepta-3-ene-1,7-dioate hydratasePGA1_c32190
HPAI
(NRULE_0199)
2,4-dihydroxyhept-2-ene-1,7-dioate aldolase
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinPGA1_c07900 PGA1_c13180 PGA1_262p02200
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPGA1_262p02180
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntR
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRPGA1_c02530
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRPGA1_c03310
G
ZNTR
(NRULE_0330)
Zinc-responsive transcriptional regulator ZntR
H
NIKR
(NRULE_0331)
Nickel-responsive transcriptional regulator NikR
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscR
J
SMTA
(NRULE_0009)
Metallothionein
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPGA1_262p02180
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulator
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinPGA1_262p02190
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinPGA1_262p02200
Mycosamine biosynthesis(NFUNC_0095)
必須A
AMPHDII
(NRULE_0342)
GDP-3-keto-6-deoxy-D-mannose C-3 aminotransferase
GMD
(NRULE_0343)
GDP-mannose 4,6-dehydratasePGA1_c02320 PGA1_65p00310
任意 
AMPHDI
(NRULE_0341)
GDP-mycosamine glycosyltransferase
Naphthalene degradation (via hydroxylation by dioxygenase)(NFUNC_0067)
必須A
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitPGA1_262p01370 PGA1_c05010
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenasePGA1_c32210
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAHG
(NRULE_0190)
Salicylate hydroxylase
B
RHDA
(NRULE_0048)
Ring-hydroxylating dioxygenase alpha subunitPGA1_262p01370 PGA1_c05010
RHDB
(NRULE_0049)
Ring-hydroxylating dioxygenase beta subunit
CDDH
(NRULE_0056)
Cis-dihydrodiol dehydrogenase
EDIO
(NRULE_0058)
extradiol dioxygenasePGA1_c32210
NAHD
(NRULE_0171)
2-hydroxychromene-2-carboxylate isomerase
NAHE
(NRULE_0172)
Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
NAHF
(NRULE_0173)
Salicylaldehyde dehydrogenase
NAGG
(NRULE_0191)
Salicylate 5-hydroxylase alpha subunit
NAGH
(NRULE_0192)
Salicylate 5-hydroxylase beta subunit
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c04040 PGA1_c05020 PGA1_c25310 PGA1_262p01350
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_c05010 PGA1_c34000 PGA1_262p01370
 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
Nitrile hydratase(NFUNC_0002)
必須A
NHAA
(NRULE_0001)
Nitrile hydratase subunit alphaPGA1_c23880
NHAB
(NRULE_0002)
Nitrile hydratase subunit betaPGA1_c23870
任意 
P14K
(NRULE_0006)
Nitrile hydratase activator P14KPGA1_c23860
 
COBW
(NRULE_0007)
CobW/P47K family proteinPGA1_c08180 PGA1_c32530 PGA1_c20610
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylase
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasePGA1_c32050
PANE
(NRULE_0117)
2-dehydropantoate 2-reductase
PANC
(NRULE_0118)
Pantothenate synthetasePGA1_c32040
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class APGA1_c09800
B
BLAD
(NRULE_0125)
Beta-lactamase class D
任意 
BLAB
(NRULE_0123)
Metallo-beta-lactamase
Phenol degradation(NFUNC_0028)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylase
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylase
任意 
FDR2
(NRULE_0057)
Ferredoxin reductasePGA1_c29270
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c04040 PGA1_c25310 PGA1_c05020 PGA1_262p01350
 
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_c34000 PGA1_262p01370 PGA1_c05010
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductasePGA1_c13110 PGA1_c21090 PGA1_c06410 PGA1_c12920
Protocatechuate degradation (beta-ketoadipate pathway)(NFUNC_0014)
必須A
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitPGA1_c02550
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitPGA1_c02560
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAC
(NRULE_0069)
4-carboxymuconolactone decarboxylasePGA1_c02570
PCAD
(NRULE_0070)
3-oxoadipate enol-lactonasePGA1_c04570
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
B
PCAG
(NRULE_0066)
Protocatechuate 3,4-dioxygenase alpha subunitPGA1_c02550
PCAH
(NRULE_0067)
Protocatechuate 3,4-dioxygenase beta subunitPGA1_c02560
PCAB
(NRULE_0068)
3-carboxy-cis,cis-muconate cycloisomerase
PCAL
(NRULE_0071)
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase
PCAI
(NRULE_0072)
3-oxoadipate CoA-transferase subunit A
PCAJ
(NRULE_0073)
3-oxoadipate CoA-transferase subunit B
PCAF
(NRULE_0074)
Beta-ketoadipyl-CoA thiolasePGA1_c04090
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasePGA1_c08920
RIBA
(NRULE_0201)
GTP cyclohydrolase-2PGA1_c33340 PGA1_c08920
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDPGA1_c08870
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasePGA1_c34020 PGA1_c08930
RIBE
(NRULE_0204)
Riboflavin synthasePGA1_c08910
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFPGA1_c24990
Thiocyanate hydrolase(NFUNC_0003)
必須A
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaPGA1_c23870 PGA1_c23860
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaPGA1_c23870 PGA1_c23860
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gamma
B
SCNA
(NRULE_0003)
Thiocyanate hydrolase subunit alphaPGA1_c23860 PGA1_c23870
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gamma
C
SCNB
(NRULE_0004)
Thiocyanate hydrolase subunit betaPGA1_c23870 PGA1_c23860
SCNC
(NRULE_0005)
Thiocyanate hydrolase subunit gamma
Toluene degradation (conversion into protocatechuate via p-cresol)(NFUNC_0007)
必須A
MMA
(NRULE_0027)
Multicomponent monooxygenase alpha subunit
MMB
(NRULE_0028)
Multicomponent monooxygenase beta subunit
FDR1
(NRULE_0032)
Oxygenase electron transfer componentPGA1_c25310 PGA1_262p01350 PGA1_c05020 PGA1_c04040
MME
(NRULE_0033)
Multicomponent monooxygenase effector protein
PCHF
(NRULE_0035)
4-cresol dehydrogenase flavoprotein subunit
PCHC
(NRULE_0036)
4-cresol dehydrogenase cytochrome c subunit
PCHA
(NRULE_0037)
p-hydroxybenzaldehyde dehydrogenase
POBA
(NRULE_0038)
p-hydroxybenzoate hydroxylasePGA1_c02810
任意 
MMG1
(NRULE_0029)
Multicomponent monooxygenase gamma subunit
 
MMG2
(NRULE_0030)
Multicomponent monooxygenase gamma subunit
 
MMG3
(NRULE_0031)
Multicomponent monooxygenase gamma subunit
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinPGA1_c05010 PGA1_c34000 PGA1_262p01370
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding protein
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease protein
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinPGA1_c25590 PGA1_c22780 PGA1_c23270 PGA1_c33760
B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding protein
EHUC
(NRULE_0217)
Ectoine ABC transporter permease protein
EHUD
(NRULE_0218)
Ectoine ABC transporter permease protein
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding protein
C
BCCT
(NRULE_0220)
BCCT family transporterPGA1_c13880
D
PROP
(NRULE_0221)
Osmoprotectant transporter
E
OPUE
(NRULE_0222)
Sodium/proline symporter
F
TEAA
(NRULE_0223)
TRAP transporter substrate-binding protein TeaA
TEAB
(NRULE_0224)
TRAP transporter small transmembrane protein TeaB
TEAC
(NRULE_0225)
TRAP transporter large transmembrane protein TeaC
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060)
必須A
EPD
(NRULE_0208)
D-erythrose-4-phosphate dehydrogenase
PDXB
(NRULE_0209)
Erythronate-4-phosphate dehydrogenase
SERC
(NRULE_0210)
Phosphoserine aminotransferase
PDXA
(NRULE_0211)
4-hydroxythreonine-4-phosphate dehydrogenasePGA1_c19850
PDXJ
(NRULE_0212)
Pyridoxine 5'-phosphate synthasePGA1_c01030