Rule : extradiol dioxygenase (EDIO)
Rule Description
| ID | NRULE_0058 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Rule name | EDIO | |||||||||||||||
| Created | 2012-10-19 | |||||||||||||||
| Protein name |
Protein name
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| Gene name | Not assigned | |||||||||||||||
| Rule Trigger |
PROSITE; PS00082; hit=1 OR PFAM; PF02900; hit=1OR PFAM; PF02900; hit=1ANDPFAM; PF07746; hit=1 |
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| Cross Reference |
Gene Ontology
Family and domain databases
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| Feature |
P06622 Pseudomonas putida (Arthrobacter siderocapsulatus).
P0ABR9 Escherichia coli (strain K12).
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| General annotation |
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| Reference |
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Related Function
| Function name |
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| Dihydroxy aromatic compounds degradation (via meta-cleavage pathway) |
| Naphthalene degradation (via hydroxylation by dioxygenase) |
CDS
| Scientific name | NBRC No. | CDS | Product name |
|---|---|---|---|
| Acetobacter aceti | 14818 | AaceN1_010100015689 | aromatic ring-opening dioxygenase catalytic subunit LigB |
| Acetobacter pasteurianus | 105190 | APA32_02090 | Aromatic ring-opening dioxygenase catalytic subunit LigB |
| Acetobacter pasteurianus | 101655 | APT_2103 | aromatic ring-opening dioxygenase catalytic subunit LigB |
| Acetobacter tropicalis | 101654 | ATPR_0350 | Catechol 2,3-dioxygenase |
| ATPR_1177 | aromatic ring-opening dioxygenase catalytic subunit LigB | ||
| Acidimicrobium ferrooxidans | 103882 | Afer_1928 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Afer_2021 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Acidiphilium multivorum | 100883 | ACMV_14910 | putative extradiol dioxygenase |
| Acidobacterium capsulatum | 15755 | ACP_3138 | aromatic ring-opening dioxygenase |
| Acinetobacter radioresistens | 102413 | ACRAD_02_01690 | hypothetical protein |
| ACRAD_02_02450 | glyoxalase family protein | ||
| ACRAD_06_00520 | 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase | ||
| Acinetobacter sp. | 100985 | ACT4_045_00070 | hypothetical protein |
| Actinoalloteichus cyanogriseus | 14455 | G443_10_01370 | Catalytic LigB subunit of aromatic ring-opening dioxygenase |
| Actinomadura atramentaria | 14695 | G339_27100 | hypothetical protein |
| Actinoplanes missouriensis | 102363 | AMIS_19200 | hypothetical protein |
| AMIS_28820 | hypothetical protein | ||
| AMIS_45820 | putative ring-cleavage dioxygenase | ||
| Actinopolyspora iraqiensis | 103187 | ACTIR_069_00040 | 3,4-DHSA dioxygenase |
| ACTIR_226_00040 | extradiol dioxygenase | ||
| ACTIR_350_00150 | oxidoreductase | ||
| ACTIR_354_00150 | protocatechuate 4,5-dioxygenase | ||
| Actinosynnema mirum | 14064 | Amir_0406 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Amir_1441 | hypothetical protein | ||
| Amir_2610 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Alicyclobacillus acidocaldarius subsp. acidocaldarius | 15652 | Aaci_0340 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Aaci_0679 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Aaci_0840 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Aaci_1623 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Alteromonas macleodii | 102226 | MASE_09960 | LigB family enzyme |
| Amycolatopsis azurea | 14573 | C791_1446 | Putative cytoplasmic protein |
| C791_5119 | Catechol 2,3-dioxygenase | ||
| C791_5517 | 2,3-dihydroxybiphenyl 1,2-dioxygenase | ||
| C791_6713 | hypothetical protein | ||
| Amycolatopsis mediterranei | 13415 | RAM_07415 | extradiol ring-cleavage dioxygenase class III protein subunit B |
| RAM_12830 | 3,4-DHSA dioxygenase | ||
| RAM_29140 | 3-(2,3-dihydroxyphenyl)propionate dioxygenase | ||
| RAM_47725 | hypothetical protein | ||
| Anaerolinea thermophila | 100420 | ANT_07440 | hypothetical protein |
| Anoxybacillus flavithermus | 15317 | Aflv_2069 | Dioxygenase |
| Arthrobacter globiformis | 12137 | ARGLB_027_02040 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Bacillus amyloliquefaciens | 15535 | BAMF_0794 | catechol 2,3-dioxygenase |
| Bacillus cereus | 15305 | BC_1787 | hypothetical protein |
| Bacillus licheniformis | 12200 | BL03909 | putative oxidoreductase |
| Bacillus licheniformis | 12195 | BLi03991 | putative oxidoreductase |
| Bacillus mojavensis | 15718 | GYU_13_00680 | catechol-2,3-dioxygenase subunit |
| Bacillus mycoides | 101228 | bmyco0001_16470 | Extradiol ring-cleavage dioxygenase, class III protein, subunit B |
| Bacillus pseudomycoides | 101232 | bpmyx0001_16580 | Extradiol ring-cleavage dioxygenase, class III protein, subunit B |
| Bacillus psychrosaccharolyticus | 101233 | WYK_009_00150 | 4,5-DOPA dioxygenase extradiol-like protein |
| Bacillus subtilis | 3134 | BSU6633_12432 | catechol-2,3-dioxygenase subunit |
| Bacillus subtilis subsp. subtilis | 13719 | BSU08240 | catechol-2,3-dioxygenase subunit |
| Bacillus thuringiensis | 101235 | bthur0008_16710 | Extradiol ring-cleavage dioxygenase, class III protein, subunit B |
| Bacillus vallismortis | 101236 | BvalD_010100017642 | hypothetical protein |
| Beutenbergia cavernae | 16432 | Bcav_0866 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Bradyrhizobium diazoefficiens | 14792 | bll2967 | putative metapyrocatechase (EC 1.13.11.2) |
| bll5282 | biphenyl-2,3-diol 1,2-dioxygenase | ||
| bll6462 | hypothetical protein | ||
| Brevibacillus brevis | 100599 | BBR47_10200 | conserved hypothetical protein |
| Brevibacterium linens | 12170 | BlinB_010200012336 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Brevundimonas diminuta | 12697 | BDIM_12840 | catalytic LigB subunit of aromatic ring-opening dioxygenase family protein |
| Brevundimonas subvibrioides | 16000 | Bresu_2114 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Bresu_2365 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Caldanaerobacter subterraneus subsp. tengcongensis | 100824 | TTE1956 | conserved hypothetical protein |
| Caldilinea aerophila | 104270 | CLDAP_40990 | putative catechol 2,3-dioxygenase |
| Candidatus Korarchaeum cryptofilum | Kcr_1015 | Predicted dioxygenase | |
| Candidatus Solibacter usitatus | Acid_7090 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | |
| Catenulispora acidiphila | 102108 | Caci_1819 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Caulobacter segnis | 15250 | Cseg_1799 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Cseg_3454 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Cellulomonas fimi | 15513 | Celf_2075 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Cellulomonas flavigena | 3775 | Cfla_1556 | conserved hypothetical protein |
| Chitinophaga pinensis | 15968 | Cpin_4445 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Chromobacterium violaceum | 12614 | CV_3550 | conserved hypothetical protein |
| Chryseobacterium gleum | 15054 | HMPREF0204_10958 | aromatic ring-opening dioxygenase, catalytic subunit LigB |
| Clostridium acetobutylicum | 13948 | CA_C0851 | Ortholog ygiD E.coli |
| CA_C1420 | Protein with a fusion of two uncharacterized domains, typical for archaea | ||
| Clostridium clariflavum | 101661 | Clocl_2985 | uncharacterized protein, PH0010 family |
| Clostridium kluyveri | 12016 | CKR_0301 | hypothetical protein |
| CKR_1955 | hypothetical protein | ||
| Clostridium thermocellum | 103400 | Cthe_1168 | AMMECR1 domain protein |
| Congregibacter litoralis | 104960 | KT71_17621 | hypothetical protein |
| Corynebacterium ammoniagenes | 12612 | HMPREF0281_01051 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| HMPREF0281_01143 | aromatic ring-opening dioxygenase, catalytic subunit LigB | ||
| HMPREF0281_01855 | aromatic ring-opening dioxygenase, catalytic subunit LigB | ||
| Corynebacterium striatum | 15291 | HMPREF0308_2441 | hypothetical protein |
| HMPREF0308_2500 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Cupriavidus metallidurans | 102507 | Rmet_1324 | Metapyrocatechase (MPC) (CatO2ase) (Catechol 2,3- dioxygenase) (C23O) (protein belongs to CMGI-2) |
| Rmet_3401 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B (catalytic subunit) | ||
| Rmet_3709 | protocatechuate 4,5-dioxygenase (ligAB fusion protein) | ||
| Cystobacter fuscus | 100088 | D187_007482 | putative cytoplasmic protein |
| Cytophaga hutchinsonii | 15051 | CHU_3641 | conserved hypothetical protein |
| Deinococcus proteolyticus | 101906 | Deipr_2618 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Edwardsiella tarda | 105688 | ET1_06_01760 | hypothetical protein |
| ET1_14_00140 | hypothetical protein | ||
| Enterobacter aerogenes | 13534 | EAE_03610 | LigB family dioxygenase |
| EAE_10345 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Enterobacter cloacae subsp. cloacae | 13535 | ECL_00756 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| ECL_04366 | hypothetical protein | ||
| Enterobacter hormaechei | 105718 | HMPREF9086_1888 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| HMPREF9086_3882 | extradiol-type ring-opening dioxygenase | ||
| Escherichia coli | 3972 | EcolC_0659 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| EcolC_3277 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| EcolC_3704 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Escherichia coli | 13500 | WFL_02095 | 3-(2,3-dihydroxyphenyl)propionate dioxygenase |
| WFL_16155 | LigB family dioxygenase | ||
| WFL_22950 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Escherichia coli | 12713 | Y75_0338 | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase |
| Y75_3005 | predicted dioxygenase | ||
| Escherichia fergusonii | 102419 | EFER_2983 | putative dioxygenase |
| EFER_3064 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase (Homoprotocatechuate 2,3-dioxygenase) | ||
| Escherichia hermannii | 105704 | EH105704_19_00210 | hypothetical protein YgiD |
| Flavobacterium johnsoniae | 14942 | Fjoh_3243 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B |
| Fluviicola taffensis | 106335 | Fluta_1121 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Frateuria aurantia | 3245 | Fraau_1722 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Fraau_3277 | hypothetical protein | ||
| Geodermatophilus obscurus | 13315 | Gobs_0532 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Gobs_2012 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Gluconobacter frateurii | 101659 | GfraN1_010100005244 | hypothetical protein |
| Gordonia aichiensis | 108223 | GOACH_04_04200 | putative extradiol dioxygenase |
| GOACH_12_00060 | 2,3-dihydroxy-p-cumate dioxygenase | ||
| GOACH_13_00080 | hypothetical protein | ||
| Gordonia alkanivorans | 16433 | GOALK_026_00130 | putative oxidoreductase |
| GOALK_026_00740 | putative extradiol dioxygenase | ||
| GOALK_050_01670 | putative extradiol dioxygenase | ||
| GOALK_075_00180 | hypothetical protein | ||
| GOALK_075_00190 | hypothetical protein | ||
| Gordonia amarae | 15530 | GOAMR_12_00360 | hypothetical protein |
| GOAMR_19_00760 | catechol 2,3-dioxygenase | ||
| GOAMR_20_02010 | hypothetical protein | ||
| GOAMR_71_00400 | hypothetical protein | ||
| GOAMR_72_00730 | putative extradiol dioxygenase | ||
| Gordonia amicalis | 100051 | GOAMI_01_00020 | hypothetical protein |
| GOAMI_14_00930 | putative extradiol dioxygenase | ||
| GOAMI_15_00510 | putative extradiol dioxygenase | ||
| Gordonia araii | 100433 | GOARA_056_00110 | extradiol dioxygenase |
| Gordonia bronchialis | 16047 | Gbro_0921 | Biphenyl-2,3-diol 1,2-dioxygenase |
| Gbro_1559 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Gordonia effusa | 100432 | GOEFS_069_00410 | putative extradiol dioxygenase |
| GOEFS_115_00330 | hypothetical protein | ||
| Gordonia hirsuta | 16056 | GOHSU_28_00490 | putative extradiol dioxygenase |
| GOHSU_54_00180 | putative oxidoreductase | ||
| Gordonia namibiensis | 108229 | GONAM_03_00170 | putative dioxygenase |
| GONAM_07_00370 | putative extradiol dioxygenase | ||
| GONAM_08_00560 | putative oxidoreductase | ||
| GONAM_24_00230 | hypothetical protein | ||
| Gordonia otitidis | 100426 | GOOTI_078_00040 | hypothetical protein |
| GOOTI_192_00350 | putative extradiol dioxygenase | ||
| Gordonia polyisoprenivorans | 16320 | GOPIP_039_01250 | putative extradiol dioxygenase |
| GOPIP_064_00440 | hypothetical protein | ||
| GOPIP_068_00660 | hypothetical protein | ||
| GOPIP_092_00640 | putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| GOPIP_094_00980 | 2,3-dihydroxy-p-cumate dioxygenase | ||
| Gordonia rhizosphera | 16068 | GORHZ_069_01170 | putative extradiol dioxygenase |
| GORHZ_125_01040 | putative oxidoreductase | ||
| GORHZ_126_00220 | putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Gordonia rubripertincta | 101908 | GORBP_006_00470 | putative extradiol dioxygenase |
| GORBP_012_01310 | putative extradiol dioxygenase | ||
| GORBP_039_00010 | hypothetical protein | ||
| GORBP_065_00570 | putative oxidoreductase | ||
| GORBP_065_01170 | putative extradiol dioxygenase | ||
| GORBP_077_01140 | putative extradiol dioxygenase | ||
| Gordonia sihwensis | 108236 | GSI01S_20_00170 | putative extradiol dioxygenase |
| GSI01S_25_00080 | putative extradiol dioxygenase | ||
| GSI01S_41_00030 | hypothetical protein | ||
| Gordonia soli | 108243 | GS4_15_01070 | putative extradiol dioxygenase |
| GS4_16_00990 | hypothetical protein | ||
| Gordonia sputi | 100414 | GOSPT_044_00150 | hypothetical protein |
| GOSPT_045_00350 | putative extradiol dioxygenase | ||
| Gordonia terrae | 100016 | GOTRE_128_00760 | putative oxidoreductase |
| GOTRE_149_00100 | putative extradiol dioxygenase | ||
| Halobacillus halophilus | 102448 | HBHAL_2384 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Halomonas elongata | 15536 | HELO_4298 | putative extradiol ring-cleavage dioxygenase |
| Haloplasma contractile | HLPCO_002752 | Catalytic LigB subunit of aromatic ring-opening dioxygenase protein | |
| Holophaga foetida | HOLFODRAFT_RS19615 | hypothetical protein | |
| Hylemonella gracilis | 14920 | HGR_00804 | extradiol ring-cleavage dioxygenase III subunit B |
| HGR_01357 | protocatechuate 4,5-dioxygenase subunit beta | ||
| HGR_12312 | protocatechuate 4,5-dioxygenase subunit beta | ||
| HGR_12467 | protocatechuate 4,5-dioxygenase subunit beta | ||
| HGR_15609 | protocatechuate 4,5-dioxygenase | ||
| Hyphomonas neptunium | 14232 | HNE_0958 | extradiol-type ring-opening dioxygenase |
| HNE_2899 | glyoxalase family protein | ||
| Intrasporangium calvum | 12989 | Intca_0552 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Intca_1103 | catechol 2,3-dioxygenase | ||
| Kineococcus radiotolerans | 101839 | Krad_2653 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Kitasatospora setae | 14216 | KSE_18470 | hypothetical protein |
| KSE_53710 | hypothetical protein | ||
| KSE_75140 | putative protocatechuate 4,5-dioxygenase | ||
| Klebsiella pneumoniae | 14438 | KPR_0055 | |
| KPR_0865 | |||
| KPR_2666 | |||
| KPR_4484 | |||
| Klebsiella pneumoniae subsp. rhinoscleromatis | 105682 | HMPREF0484_0668 | putative protocatechuate 4,5-dioxygenase, alpha subunit |
| HMPREF0484_2474 | aromatic ring-opening dioxygenase, catalytic subunit LigB | ||
| HMPREF0484_4287 | 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | ||
| HMPREF0484_5091 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Kocuria rhizophila | 103217 | KRH_22020 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Kyrpidia tusciae | 15312 | Btus_0624 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Btus_0957 | catechol 2,3 dioxygenase | ||
| Btus_1572 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Btus_2318 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Btus_2904 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Kytococcus sedentarius | 15357 | Ksed_13640 | uncharacterized conserved protein |
| Labrenzia aggregata | 16684 | SIAM614_21797 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| SIAM614_21802 | Extradiol ring-cleavage dioxygenase:Glyoxalase/Bleomycin resistance protein/dioxygenase domain:Glyoxalase I | ||
| SIAM614_27932 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | ||
| Lactobacillus helveticus | 15019 | HMPREF0518_0304 | hypothetical protein |
| Leadbetterella byssophila | 106382 | Lbys_2871 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Leptospira interrogans | LA_3581 | dioxygenase-like protein | |
| Leuconostoc lactis | 107866 | EY7_143_00010 | Putative uncharacterized protein |
| Leuconostoc pseudomesenteroides | 107767 | LpseK3_010100004752 | hypothetical protein |
| Limnochorda pilosa | 110152 | LIP_2168 | catechol 2,3 dioxygenase |
| Magnetospirillum gryphiswaldense | 15271 | MGR_1477 | Glyoxalase/bleomycin resistance protein/dioxygenase |
| MGR_3425 | Catalytic LigB subunit of aromatic ring-opening dioxygenase | ||
| Magnetospirillum magnetotacticum | 15272 | Magn03009774 | COG3384: Uncharacterized conserved protein |
| Magn03009964 | COG3384: Uncharacterized conserved protein | ||
| Magn03010974 | COG3384: Uncharacterized conserved protein | ||
| Marinomonas mediterranea | 103028 | Marme_0836 | Protocatechuate 4,5-dioxygenase |
| Marme_1168 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Marme_2128 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Mariprofundus ferrooxydans | SPV1_09393 | extradiol-type ring-opening dioxygenase | |
| Meiothermus ruber | 106122 | Mrub_1330 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Meiothermus silvanus | 106475 | Mesil_2314 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Methanocaldococcus jannaschii | 100440 | MJ_0403 | conserved hypothetical protein |
| Methanococcus maripaludis | 101832 | MMP1387 | Protein of unknown function DUF52 |
| Methanococcus maripaludis | MmarC5_1150 | transcriptional regulator, MarR family | |
| Methanopyrus kandleri | MK0963 | Predicted dioxygenase | |
| Micrococcus luteus | 3333 | Mlut_20010 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Microlunatus phosphovorus | 101784 | MLP_01990 | oxidoreductase |
| Micromonospora aurantiaca | 16155 | Micau_1902 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Myroides odoratus | 14945 | Myrod_0617 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Nakamurella multipartita | 105858 | Namu_0046 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Namu_0752 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Namu_1342 | 3-carboxyethylcatechol 2,3-dioxygenase | ||
| Namu_4104 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Niastella koreensis | 106392 | Niako_1477 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Nitriliruptor alkaliphilus | NitalDRAFT_0751 | protocatechuate 4,5-dioxygenase, beta chain | |
| NitalDRAFT_2666 | Catalytic LigB subunit of aromatic ring-opening dioxygenase. | ||
| NitalDRAFT_4816 | 2,3-dihydroxyphenylpropionate 1,2-dioxygenase | ||
| Nitrosomonas europaea | 14298 | NE0738 | conserved hypothetical protein |
| Nitrospina gracilis | NITGR_100073 | conserved hypothetical protein | |
| NITGR_1060022 | putative enzyme | ||
| Nocardiopsis dassonvillei | 14626 | Ndas_4300 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Paenibacillus alvei | 3343 | PAV_2c04560 | 4,5-DOPA dioxygenase extradiol-like protein |
| PAV_4c03030 | hypothetical protein | ||
| Paenibacillus peoriae | 15541 | PpeoK3_010100004800 | 4,5-DOPA dioxygenase extradiol |
| PpeoK3_010100019929 | 4,5-DOPA dioxygenase extradiol-like protein | ||
| Paenibacillus polymyxa | 15309 | PPT_04115 | MFS transporter |
| PPT_17200 | MFS transporter | ||
| Pedobacter heparinus | 12017 | Phep_4269 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Pedobacter saltans | 100064 | Pedsa_2473 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Pelobacter carbinolicus | 103641 | Pcar_0172 | 3,4-dihydroxyphenylalanine extradiol dioxygenase, putative |
| Pcar_1651 | MEMO-like protein | ||
| Pelobacter propionicus | 103807 | Ppro_1691 | protein of unknown function DUF52 |
| Phaeobacter gallaeciensis | 16654 | PGA1_c32210 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD |
| Picrophilus torridus | 100828 | PTO0414 | hypothetical protein |
| Proteus mirabilis | 105697 | HMPREF0693_2565 | aromatic ring-opening dioxygenase, catalytic subunit LigB |
| Providencia alcalifaciens | 105687 | PROVALCAL_00332 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| PROVALCAL_02254 | aromatic ring-opening dioxygenase, catalytic subunit LigB | ||
| Pseudomonas putida | 100650 | PP_1869 | conserved hypothetical protein |
| PP_2518 | protocatechuate 4,5-dioxygenase, putative | ||
| Pseudomonas stutzeri | 14165 | PSTAB_2033 | catalytic LigB subunit of aromatic ring-opening dioxygenase |
| Pyrococcus horikoshii | 100139 | PH0757 | conserved hypothetical protein |
| Rahnella aquatilis | 105701 | Rahaq2_0648 | hypothetical protein |
| Renibacterium salmoninarum | 15589 | RSal33209_1502 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| Rhizobium etli | 15573 | RHE_PE00065 | hypothetical conserved protein |
| Rhizobium sp. | 101917 | NGR_b20130 | Catechol 2,3-dioxygenase |
| Rhizobium tropici | 15247 | RTCIAT899_PC02990 | extradiol ring-cleavage dioxygenase, class III enzyme, subunit B |
| RTCIAT899_PC03855 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Rhodobacter capsulatus | 16581 | RCAP_rcc00816 | extradiol ring-cleavage dioxygenase, class III enzyme, subunit B |
| Rhodobacter sphaeroides | 12203 | RSP_3123 | Conserved hypothetical protein |
| Rhodococcus erythropolis | 100887 | RER_07570 | extradiol dioxygenase |
| RER_13780 | extradiol dioxygenase | ||
| RER_33580 | conserved hypothetical protein | ||
| RER_51660 | extradiol dioxygenase | ||
| Rhodococcus opacus | 108011 | ROP_07440 | hypothetical protein |
| ROP_22150 | extradiol dioxygenase | ||
| ROP_44560 | extradiol dioxygenase | ||
| ROP_46210 | extradiol dioxygenase | ||
| ROP_46420 | 2,3-dihydroxy-p-cumate dioxygenase | ||
| ROP_58640 | extradiol dioxygenase | ||
| ROP_70940 | extradiol dioxygenase | ||
| ROP_pROB02-01620 | catechol 2,3-dioxygenase | ||
| ROP_pROB02-01950 | extradiol dioxygenase NimB | ||
| Rubrobacter xylanophilus | 100952 | Rxyl_2243 | Catechol 2,3-dioxygenase |
| Saccharomonospora azurea | 14651 | SacazDRAFT_01476 | hypothetical protein |
| SacazDRAFT_02737 | hypothetical protein | ||
| Saccharomonospora cyanea | 14841 | SaccyDRAFT_3646 | hypothetical protein |
| SaccyDRAFT_5162 | hypothetical protein | ||
| Saccharomonospora glauca | 14831 | SacglDRAFT_02231 | hypothetical protein |
| SacglDRAFT_03137 | hypothetical protein | ||
| SacglDRAFT_04354 | hypothetical protein | ||
| Saccharomonospora viridis | 12207 | Svir_27660 | hypothetical protein |
| Svir_38360 | protocatechuate 4,5-dioxygenase beta subunit | ||
| Svir_39480 | uncharacterized conserved protein | ||
| Saccharopolyspora spinosa | 15153 | SspiN1_010100008998 | extradiol ring-cleavage dioxygenase |
| Saccharothrix espanaensis | 15066 | BN6_04510 | putative sensor with HAMP domain |
| BN6_34240 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Salinispora arenicola | 105043 | Q5S_1928_00020 | biphenyl-2,3-diol 1,2-dioxygenase bphC |
| Salinispora tropica | 105044 | Strop_2669 | Biphenyl-2,3-diol 1,2-dioxygenase |
| Selenomonas ruminantium subsp. lactilytica | 103574 | SELR_10530 | hypothetical protein |
| Serratia odorifera | 102598 | HMPREF0758_0655 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
| HMPREF0758_1948 | aromatic ring-opening dioxygenase, catalytic subunit LigB | ||
| Shimwellia blattae | 105725 | EB105725_09_00110 | 2,3-dihydroxyphenylpropionate/2,3-dihydroxicinnamic acid 1,2-dioxygenase |
| EB105725_20_00180 | hypothetical protein YgiD | ||
| EB105725_26_00150 | putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Solitalea canadensis | 15130 | Solca_2239 | hypothetical protein |
| Sphingobacterium spiritivorum | 14948 | HMPREF0766_12048 | aromatic ring-opening dioxygenase, catalytic subunit LigB |
| Sphingobium japonicum | 101211 | SJA_C1-02230 | putative extradiol ring-cleavage dioxygenase |
| SJA_C1-11960 | catechol 2,3-dioxygenase | ||
| SJA_C1-32520 | catalytic LigB subunit of aromatic ring-opening dioxygenase | ||
| Sphingobium sp. | 103272 | SLG_01800 | protocatechuate 4,5-dioxygenase beta chain |
| SLG_03330 | gallate dioxygenase | ||
| SLG_03370 | extradiol dioxygenase | ||
| SLG_06370 | glyoxalase-family protein | ||
| SLG_07720 | 2,2',3-trihydroxy-3'-methoxy-5,5'-dicarboxybiphenyl dioxygenase | ||
| SLG_12500 | protocatechuate 4,5-dioxygenase beta chain | ||
| SLG_19030 | 3-O-methylgallate 3,4-dioxygenase | ||
| SLG_37520 | protocatechuate 4,5-dioxygenase beta chain | ||
| Sphingomonas echinoides | 15742 | SechA1_010100000910 | aromatic ring-cleaving dioxygenase |
| Sphingomonas wittichii | 105917 | Swit_0894 | Glyoxalase/bleomycin resistance protein/dioxygenase |
| Swit_1041 | hypothetical protein | ||
| Swit_1538 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_1756 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_2867 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | ||
| Swit_3046 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_3064 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | ||
| Swit_3298 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_3407 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_4182 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Swit_4311 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B | ||
| Swit_4902 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Sporichthya polymorpha | 12702 | Spopo_31_10850 | Extradiol ring-cleavage dioxygenase class III pr otein subunit B |
| Spopo_31_18190 | Extradiol ring-cleavage dioxygenase class III pr otein subunit B | ||
| Staphylococcus epidermidis | 12993 | SE_2070 | conserved hypothetical protein |
| Streptomyces avermitilis | 14893 | SAV3696 | hypothetical protein |
| Streptomyces clavuligerus | 13307 | SCLAV_2337 | extradiol ring-cleavage dioxygenase class III protein subunit B |
| SCLAV_4799 | Extradiol ring-cleavage dioxygenase | ||
| Streptomyces ghanaensis | 15414 | SSFG_04163 | hypothetical protein |
| SSFG_07156 | ScmA | ||
| SSFG_07754 | extradiol dioxygenase | ||
| Streptomyces mobaraensis | 13819 | H340_14866 | hypothetical protein |
| H340_31940 | hypothetical protein | ||
| Streptomyces pristinaespiralis | 13074 | SSDG_02526 | extradiol ring-cleavage dioxygenase III subunit B |
| Streptomyces purpureus | 13925 | STRPU_10_02420 | Putative uncharacterized protein |
| STRPU_16_00560 | Putative uncharacterized protein | ||
| Streptomyces sviceus | 13980 | SSEG_00067 | extradiol ring-cleavage dioxygenase III subunit B |
| SSEG_08859 | extradiol ring-cleavage dioxygenase III subunit B | ||
| Streptomyces venezuelae | 13096 | SVEN_3059 | putative cytoplasmic protein |
| Streptosporangium roseum | 3776 | Sros_4715 | hypothetical protein |
| Sros_7503 | putative dioxygenase | ||
| Sros_7520 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Sulfolobus tokodaii | 100140 | STK_07710 | putative dioxygenase |
| Thauera linaloolentis | 102519 | C666_03830 | catechol 2,3-dioxygenase, LapB |
| C666_09810 | protocatechuate 4,5-dioxygenase subunit beta | ||
| C666_10170 | glyoxalase/bleomycin resistance protein/dioxygen | ||
| C666_16255 | catechol 2,3 dioxygenase | ||
| C666_17800 | hypothetical protein | ||
| Thermanaerovibrio acidaminovorans | Taci_0918 | AMMECR1 domain protein | |
| Thermococcus sp. | GQS_08450 | Dioxygenase, putative | |
| Thermodesulfobacterium commune | HL41_03135 | hypothetical protein | |
| Thermodesulfovibrio yellowstonii | THEYE_A0338 | conserved protein | |
| Thermomicrobium roseum | trd_0322 | catechol 2,3-dioxygenase | |
| trd_1396 | catechol 2,3-dioxygenase | ||
| trd_1688 | Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily | ||
| trd_A0935 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase | ||
| Thermomonospora curvata | 15933 | Tcur_0529 | catechol 2,3 dioxygenase |
| Tcur_0687 | Extradiol ring-cleavage dioxygenase class III protein subunit B | ||
| Tcur_3516 | Glyoxalase/bleomycin resistance protein/dioxygenase | ||
| Thermoproteus neutrophilus | 100436 | Tneu_0059 | protein of unknown function DUF52 |
| Thermus thermophilus | 101084 | TTHA0962 | homoprotocatechuate 2,3-dioxygenase |
| TTHB250 | metapyrocatechase (catechol 2,3-dioxygenase) | ||
| Thermus thermophilus | 101085 | TT_C0596 | homoprotocatechuate 2,3-dioxygenase |
| Tsukamurella paurometabola | 16120 | Tpau_3264 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Tpau_3843 | Biphenyl-2,3-diol 1,2-dioxygenase | ||
| Weeksella virosa | 16016 | Weevi_0820 | Extradiol ring-cleavage dioxygenase class III protein subunit B |
| Yersinia bercovieri | 105717 | yberc0001_34810 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B |
| Yersinia rohdei | 105715 | yrohd0001_16840 | Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B |
| Zimmermannella faecalis | 15706 | G328_07445 | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
